Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3660 ATGGTGGCGGAAGCAGAGGTTGTGTGTCAACAAAGCGTGGGGGTGTTGGATGTGAAGTATTTTCTGAATAAAGGAAGCAATATTCATGAGATCGGTGATGCAGATGCTATAACGCCTTCGAATTTTGATCGAGTTCGTGCTTCTGAATCAGTTTCCGCTGAGTTACTTACTACAAAAGAAGATGTTAAGACTGCAGACATAATCTCAGAAGCTGCAGTTCTGCAATTTGTCCCCTGCATCCGTTCCGGTAGTTTTTCCGATATTGGGCCACGTAGATACATGGAAGATGAACATATAAGGATAGATGATTTGACTTCTCATCTAGGATCACTATATAAGTTTCCTAAACCAAGTGCCTTTTACGGGGTGTTTGATGGTCATGGAGGACCTGAAGCAGCAGCTTACATAAGAAAAAATGTTATAAAATTCTTCTTTGAGGATGTCAATTTCCCTCAGACATCTGAAGTTGATAACATATTTTTACAAGAGGTTGAGAATTCCCTCAGAAAGGCTTTTCTTTTGGCGGATTCGGCTATGGCTGATGATTGCAGTGTGAACACTTCTTCAGGGACCACAGCTCTTACTGCTATGATATTTGGAAGACTTCTAATGGTGGCCAATGCTGGTGACTGTCGAGCAGTTCTCAGTCGTAAAGGAGAGGCCATTGATATGTCTCAAGATCACCGGCCTATTTATCCAATAGAGCGGAGACGAGTTGAAGAATTGGGCGGCTATGTAGAAGATGGTTACCTAAATGGCGTTTTATCAGTTACCAGAGCATTAGGGGACTGGGACATGAAGTTACCTAGGGGTGTTCCCTCGCCTTTGATTGCAGAGCCCGAGTTCCGTCAAATGGTTCTAACAGATGACGACGAATTCCTCATCATAGGATGTGATGGCATCTGGGATGTGATGTCAAGCCAGCATGCCGTTAGCCTGGTACGTAAAGGCTTGAGGAGGCATGATGACCCAGATAAGTGCGCCAGGGATCTAGTTATGGAGGCATTACGCCTCAATACATTCGATAATCTTACAGTGATCATTATATGTCTGTCTTCCATTGACCATGGGGAGTCAGAGCCATCCCCACCTCCCCAACGGAAACTGAGATGCTGCAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGAAATTTGTTGGAAGGAAGTGCTAGCAACTGA 1179 0.4461 MVAEAEVVCQQSVGVLDVKYFLNKGSNIHEIGDADAITPSNFDRVRASESVSAELLTTKEDVKTADIISEAAVLQFVPCIRSGSFSDIGPRRYMEDEHIRIDDLTSHLGSLYKFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVNFPQTSEVDNIFLQEVENSLRKAFLLADSAMADDCSVNTSSGTTALTAMIFGRLLMVANAGDCRAVLSRKGEAIDMSQDHRPIYPIERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGVPSPLIAEPEFRQMVLTDDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPDKCARDLVMEALRLNTFDNLTVIIICLSSIDHGESEPSPPPQRKLRCCSLSAEALCSLRNLLEGSASN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3660 392 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Psa6g3660 392 Pfam Protein phosphatase 2C 91 343 IPR001932 -
Psa6g3660 392 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 373 - -
Psa6g3660 392 CDD PP2Cc 80 351 IPR001932 -
Psa6g3660 392 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Psa6g3660 392 Gene3D - 66 357 IPR036457 -
Psa6g3660 392 ProSiteProfiles PPM-type phosphatase domain profile. 81 351 IPR001932 -
Psa6g3660 392 SMART PP2C_4 71 349 IPR001932 -
Psa6g3660 392 SUPERFAMILY PP2C-like 74 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3660 Psa-Chr6 317452208 317454992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3660 94 388 PP2C-type Phosphatase Gene Family AT3G62260 68.919 3.16e-154 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Psa6g3660 PP2C 1.2e-62 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3660 K14803 - gmx:100819791 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3660 6 317452208 317454992 Psa6g3660 6 317452208 317454992 ECH