LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa6g3657	GACGCAGAGATGGTAGAATCTCTATCATGGAAGAAGTCACACAAAATCTACCACCACCAACTTTCAAAGCGGAGGAACTTATCAAACGTTTTTCCATAAAAGGTTTATCAGCAGATGAAATGGTTACACTTTCTGGAGCTCATTCTATTGGTGTCTCACATTGTTCCTCTTTCTCAAACCGATTATACTCTTTCAACGCTACGTTTTCTCAAGATCCTTCCATGGACCCTAAGTTTGCTATGATGTTGAAATCCAAGTGTCCACCACCACAATCACAGACAAGAGACCCAACGGTGGTGTTTGATGGTTCGACACCTAATGATCTGGACAACATGTACTATATGAAGTTGAAGAATAAGCGTGGTTTATTAACTTCAGATCAAACATTGGCCGATAGTGAGTTAACAAAGAGAATGGTGTTAAAAAATGCTAGACATAGTGCAATATGGAGAGTGAAGTTTGCAAAGGCCATGGTGCATATGGGTTCCATACAAGTCTTGACAGGTTCTCAAGGTGAGATTAGAGAACGCTGCAGCGTTGTCAATTTTCATTAA	554	0.4025	RRDGRISIMEEVTQNLPPPTFKAEELIKRFSIKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFNATFSQDPSMDPKFAMMLKSKCPPPQSQTRDPTVVFDGSTPNDLDNMYYMKLKNKRGLLTSDQTLADSELTKRMVLKNARHSAIWRVKFAKAMVHMGSIQVLTGSQGEIRERCSVVNFH*	184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa6g3657	183	PRINTS	Plant peroxidase signature	115	132	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PRINTS	Plant peroxidase signature	38	50	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PRINTS	Plant peroxidase signature	99	114	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PRINTS	Plant peroxidase signature	155	168	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	ProSiteProfiles	Plant heme peroxidase family profile.	1	181	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	SUPERFAMILY	Heme-dependent peroxidases	1	181	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	ProSitePatterns	Peroxidases proximal heme-ligand signature.	39	49	IPR019793	-
	Psa6g3657	183	Gene3D	Peroxidase, domain 2	17	160	-	-
	Psa6g3657	183	Pfam	Peroxidase	1	143	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PRINTS	Haem peroxidase superfamily signature	39	54	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PRINTS	Haem peroxidase superfamily signature	101	116	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PANTHER	PEROXIDASE 25-RELATED	1	179	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa6g3657	183	PANTHER	PEROXIDASE	1	179	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa6g3657	Psa-Chr6	317435895	317436448	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa6g3657	1	181	Peroxidase	AT2G18980	39.779	4.21e-41	139

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa6g3657	K00430		-	gmx:100790188	250.751

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa6g3657	6	317435895	317436448	Psa6g3657	6	317435895	317436448	ECH