Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3653 ATGGAAAGTAAGGTACTTGTTTCAGCAGTTTCTCTGATTCTTGTAGTTGGTGTTGCATTAGGTGTTGTTGCTCTTGTTCGAAGCAACGGGCCAGGTGAGAGTGGAGGTGGCGATTTGAATGCACATACTAAAGCGGTTCAAGCCGTGTGTCAAGGCAGCGATGACAAAAAATTGTGTGTTGATACTCTTAAACCTGTTAACACATCGGATCCAAATGATTATATAAAAGCCGTTGTTAAAACATCCTTGGAAAGTGTCTTCAAAGCGTTAAACTTGAGCGATAAGCTCATAATTGAAAATGAAAAGAAAGAACAACCCACCAAGATGGCACTTGAGGATTGTAAAGATTTGTTACAATTCGCAATTGATGAATTACAAGCGTCTACTATTTTAGTTAATGACGGCCAAGGTAGAAACCCGAACGATCGTGCTGCGGATCTTAAAAACTGGTTAGGTGCTGTTATTGCGTATCAACAATCATGTCTAGATGGTTTAGATACGGATAACGAAAAGAAGCTTCAATCAGAGTTGAAAACAGGTAGTTTGGATCAGGTAGAGAAACTTACCGCACTAGCGCTTGATATTGTGACTGCTGTTTCGCAAGTACTATCTTCATTGAATTTGGATTTGAATGTGCAACCTACGCATCGTCGTCTTTTTGACGTGGATAGCGATGGTTATCCGGAATGGATGAGTGGCCCGGATCGTAAGTTATTGGCTGATATGCGTACAGGAGCCGCTGTTACACCTAATGTAGTTGTTGCCAAAGATGGTTCTGGACAATTTAAGACGGTTCTTGAGGCGATTAATTCATACCCGCCAAAACATGTTGGTAGATATGTTATCTATGTTAAGGCCGGTGTCTATGACGAATATATTCAGATTGACAAAAAGAAGAAGAGTATGTTGATCTACGGCGATGGCCCTACAAAGACTATTATCACCGGCAAGAAAAATGTTGTTGATGGTTGGAAGACAATGAGATCTGCTACATTCTCTACTGTTGCTGAAGATTTCATTGCAAAGGCAATTGCATTCGAGAATACTGCAGGAGCAAACAAACATCAAGCCGTGGCGTTACGAGTGCAAGGTGACCGATCGGCTTTCTACGACTGTGCCATGCGTGGTTACCAAGACACATTATACGCCCACGCCCATCGTCAGTTCTACAGAAACTGCGAAATTTCTGGGACAGTTGATTTCATTTTCGGCTACGGATCAACACTGATACAAAACTCGAAAATTGTAGTCCGAAAACCCGAACCAAATCAACAAAACATCATTGTAGCCGATGGAACAATTCAAAAGAACATGCCTACAGGAGTTGTGCTGCAAAACTGCGAGATCGGACCAGAGCCAGCACTACAAGCAGATAGATTGACGGTGAGATCATATTTGGCAAGACCATGGAAAGCATATTCTAGGGCAATATTCATGGAAAATGTGATTGGTGATTTGATTCAACCAGTGGGATTTCTTCCTTGGAATGGGAACCTATTTCTTGACACATGTTACTTTGCTGAGTATGCAAATACTGGACCTGGTGCAGACGTTAAAGCAAGAGTTCCGTGGAGCAAAGGTGTTCTTAGCAAAGCTGATGCAATGAAATATACTGCTGATCAATGGCTTAAAGGTGGAATTTGGTTGCCTGCTACTGGTGTACCATTTGAGCTTGGCTTCACTAAACCTTGA 1692 0.4196 MESKVLVSAVSLILVVGVALGVVALVRSNGPGESGGGDLNAHTKAVQAVCQGSDDKKLCVDTLKPVNTSDPNDYIKAVVKTSLESVFKALNLSDKLIIENEKKEQPTKMALEDCKDLLQFAIDELQASTILVNDGQGRNPNDRAADLKNWLGAVIAYQQSCLDGLDTDNEKKLQSELKTGSLDQVEKLTALALDIVTAVSQVLSSLNLDLNVQPTHRRLFDVDSDGYPEWMSGPDRKLLADMRTGAAVTPNVVVAKDGSGQFKTVLEAINSYPPKHVGRYVIYVKAGVYDEYIQIDKKKKSMLIYGDGPTKTIITGKKNVVDGWKTMRSATFSTVAEDFIAKAIAFENTAGANKHQAVALRVQGDRSAFYDCAMRGYQDTLYAHAHRQFYRNCEISGTVDFIFGYGSTLIQNSKIVVRKPEPNQQNIIVADGTIQKNMPTGVVLQNCEIGPEPALQADRLTVRSYLARPWKAYSRAIFMENVIGDLIQPVGFLPWNGNLFLDTCYFAEYANTGPGADVKARVPWSKGVLSKADAMKYTADQWLKGGIWLPATGVPFELGFTKP* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3653 563 PANTHER PECTINESTERASE 6 561 - -
Psa6g3653 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 200 IPR035513 -
Psa6g3653 563 CDD PMEI-like_3 48 200 - -
Psa6g3653 563 SMART PMEI_2 41 195 IPR006501 GO:0004857
Psa6g3653 563 Pfam Pectinesterase 251 545 IPR000070 GO:0030599|GO:0042545
Psa6g3653 563 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 196 IPR006501 GO:0004857
Psa6g3653 563 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Psa6g3653 563 Gene3D - 245 560 IPR012334 -
Psa6g3653 563 Pfam Plant invertase/pectin methylesterase inhibitor 45 195 IPR006501 GO:0004857
Psa6g3653 563 SUPERFAMILY Pectin lyase-like 246 558 IPR011050 -
Psa6g3653 563 PANTHER PECTINESTERASE 6 561 - -
Psa6g3653 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3653 Psa-Chr6 317036534 317038500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3653 5 560 Carbohydrate Esterase AT3G05610 40.463 2.74e-141 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3653 K01051 - gmx:100820142 808.135