Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3635 ATGGGATATCTAATTGCTATAGCCATGGTGATTTCCACTATTATGATTTGGAGAGTATGTGTAATTCTGTTTTGGAGGCCATATGCAGTGAGAAAGCACTTTCGAAAGCAAGGAGTGACGGGGCCACCATGCTACTCGTTTCTCCATGGTTCTCTTCATGATATGAAAATAATGATGAAGGATGCAAGAAAAGCGATTATGGATAAACACTCGCATGATATTACTCAAAGGGTTCTTCCTCACTACCACATATGGTCCTCCTTATATGGAGAGAGATTTCTGTATTGGTATGGAACCGAACCTAGAATTTGCATAACTGATGCAGAGCTGGTGAAGGAGATTTTATCCAATAAATTTGGTTTCTATGAAAAACCAAAAGTAAGGCCTTCAATAGTAACATTGATGGGAAATGGGTTACTTCTAGTGACAGGAGTGGATTGGGTTAAGCACAGAAGAATACTCAATGCTGCTTTCTCCATGGATAAACTCAAGGGTATGATAAGTAGAATGGCAACATGTACCATTTCCATGCTAGATGAATGGAAAAGGCAATTAGCCATTGAAGCAAAGAACAAATCATTGACAATAGAGATGTGTGAAGAATTTCGAGAACTAACGTCTGCTATAATAGCTCATACTTTCTTCGGTACTAGCTTTGCTCATGGAAAAGAAGCCTTTAATGCACAAACAAAGCTTCAACATCTTATTGCTGCTTCAAGTTTTGATGTTTTCATTCCTGGCATTCAATATATTCCTACTAGGAAAAATTTGGAGATATGGAAGCTTGATAGGAAAATTACGAAATCACTACAATGCATTATTGAAAGTAGGTTGAATTCTCAGTCAGATAGCTCCTTTTATGGAGATGATCTACTGGACATAATGATGGATACAAAAAATGATGGTCCTAATAAGTTGAACATGAATGAAATCATGGAAGAGTGCAAGACATTTTTCTTTGCTGGTCATGAAGCCACTTCACACTTACTTGTTTGGACTGTCTTTTTGTTGAGTTTGCATAAAGATTGGCAAGAGAAACTTAGACAAGAAGTCATGCAGATTTGTGGCATGGAAATTCCTGATCCAGATATGCTATCAAATTTGCATAAAGATTGGCAAGAGAAACTTAGACAAGAAGTCATGCAGATTTGTGGCATGGAAATTCCTGATCCAGATATGCTATCAAAGTTAAAAATGGTGAATATGGTGTTGCTGGAAGCATTGAGGTTGTATTGTCCTGTAATAGAATTAGTGAGAATGGCTTCAAAAGATATGAAACTAGGAGATTTGATGATCCCAAGAGGAACAGGCCTCGTGATCCCAATTACAATGATTCATAGAAGTAAAGAATACTGGGGTGAAGATTCAAATGACTTCAATCCAATGAGATTCATAAATGGAGCATTTAAGGCTGCAAAACACCCAAATGCACTACTTCCGTTTTCGATGGGTCCAAGAAATTGCATTGGTCAAAAATTTTCAATGATGCAAGCTAAAACAGTGATTGCTTTAATTCTTCAGAGGTTTTCTTGGTCTCTTTCTCCTGACTATCAACATGCACCTGATAAGAACCTTACTTTGCAGCCACAACATGGTCTTCCCATCATTGTAAAACCATTGCAGCTATAA 1629 0.3745 MGYLIAIAMVISTIMIWRVCVILFWRPYAVRKHFRKQGVTGPPCYSFLHGSLHDMKIMMKDARKAIMDKHSHDITQRVLPHYHIWSSLYGERFLYWYGTEPRICITDAELVKEILSNKFGFYEKPKVRPSIVTLMGNGLLLVTGVDWVKHRRILNAAFSMDKLKGMISRMATCTISMLDEWKRQLAIEAKNKSLTIEMCEEFRELTSAIIAHTFFGTSFAHGKEAFNAQTKLQHLIAASSFDVFIPGIQYIPTRKNLEIWKLDRKITKSLQCIIESRLNSQSDSSFYGDDLLDIMMDTKNDGPNKLNMNEIMEECKTFFFAGHEATSHLLVWTVFLLSLHKDWQEKLRQEVMQICGMEIPDPDMLSNLHKDWQEKLRQEVMQICGMEIPDPDMLSKLKMVNMVLLEALRLYCPVIELVRMASKDMKLGDLMIPRGTGLVIPITMIHRSKEYWGEDSNDFNPMRFINGAFKAAKHPNALLPFSMGPRNCIGQKFSMMQAKTVIALILQRFSWSLSPDYQHAPDKNLTLQPQHGLPIIVKPLQL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3635 542 PANTHER CYTOCHROME P450 FAMILY MEMBER 367 536 - -
Psa6g3635 542 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 368 - -
Psa6g3635 542 Gene3D Cytochrome P450 24 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Psa6g3635 542 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 Pfam Cytochrome P450 88 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 Pfam Cytochrome P450 369 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 Gene3D Cytochrome P450 369 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3635 542 PANTHER P450, PUTATIVE-RELATED 5 368 - -
Psa6g3635 542 PANTHER P450, PUTATIVE-RELATED 367 536 - -
Psa6g3635 542 SUPERFAMILY Cytochrome P450 70 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3635 Psa-Chr6 314185158 314188086 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3635 17 541 Cytochrome P450 AT2G46960 48.302 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3635 K20660 - aprc:113872106 726.472