Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3626 ATGAGAATGAAGCTGCTGATTTTGTTTGCATGCTTAGTTTCTGGGTTTATCTCCTCTAGATCTGAGACACTGTTTTCTTTCTCACAAAACGATGTCGTCTCACCTAATCCATTGCAACAACTTATGGTTAACCTCACTCTCATTCAAGGAGCTGATTCCAAAGGAGCTGTCTGTTTGGATGGGACATTGCCTGGTTACCATTTGGATCGTGGATTTGAATCTGGTGCAAATAGTTGGCTTATTCATCTTGAGGGAGGAGGATGGTGTAACACTATCAGAAACTGTGTGTATAGAAAAAAGACTCGTCGTGGTTCCTCAAACTACATGGAAAATCAAATACCATTCACAGGAATATTGAGTAATAAACCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGAGCATCTTTTACAGGAGATAGTGAAAATGAGGCTGCAGGACTTCAGTTTCGAGGACAAAAAATATGGCTAGCTGCAATAGATGAATTAATGTCTCAAGGAATGCATAATGCCGAACAGGCCCTTCTCTCTGGATGTTCTGCGGGTGGCCTTGCATCCATACTACATTGTGATGAGTTCCAGAGCTTGTTACCAAAATCTTCCAAAGTGAAGTGTTTTAGTGATGCAGGATTTTTTCTAGATGCAATTGATGTATCTGGAGGACGCACATTGAGAAATCTGTTCGGAGGCGTAGTTCAGTTACAGGAAGTACAAAAAAATCTGCCAAAAAATTGTCTCAACAAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTTGAACATGTTGAGACACCGTTGTTTCTACTCAACACGGCTTATGATGTGTGGCAGGTTCAAGCCAGTTTAGCCCCAGTGACAGCCGATCCTCTTGGCTCTTGGAATGACTGCAAATCAAACCATGCAAATTGTAGCTCGTCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGGTTGACGACCTGAAAGACTTCTCAAGACCGTCTCAAACTGGACTTTTCATAAATTCCTGTTTTGCTCATTGCCAGTCGGAGAGACAGGAGACATGGTTCGCGGATGACTCTCCTCTTCTCGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTCGACAGAGAAGTTGTAAAATCTATAGACTGTCCTTACCCTTGTGACAATAACTGCCATAATTTGGTGTTTAGAAGAGTATAA 1227 0.4165 MRMKLLILFACLVSGFISSRSETLFSFSQNDVVSPNPLQQLMVNLTLIQGADSKGAVCLDGTLPGYHLDRGFESGANSWLIHLEGGGWCNTIRNCVYRKKTRRGSSNYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFTGDSENEAAGLQFRGQKIWLAAIDELMSQGMHNAEQALLSGCSAGGLASILHCDEFQSLLPKSSKVKCFSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEVQKNLPKNCLNKLDPTSCFFPQNLVEHVETPLFLLNTAYDVWQVQASLAPVTADPLGSWNDCKSNHANCSSSQIQFLQDFRNQMVDDLKDFSRPSQTGLFINSCFAHCQSERQETWFADDSPLLEDKPIAVAVGDWYFDREVVKSIDCPYPCDNNCHNLVFRRV* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3626 408 Pfam Pectinacetylesterase 39 386 IPR004963 GO:0016787
Psa6g3626 408 PANTHER PECTIN ACETYLESTERASE 2 406 - -
Psa6g3626 408 PANTHER NOTUM-RELATED 2 406 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3626 Psa-Chr6 307422916 307426074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3626 6 407 Carbohydrate Esterase AT1G57590 66.423 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3626 K19882 - gmx:100786972 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0371 3 35424779 35427683 Psa6g3626 6 307422916 307426074 PCT