Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3609 ATGAACAAGCGTTCATTCAAGTATGTTTGGGTGCTTGACAAGCTCAAGGCTGAAAGGGAAAGAGGTATCACTATTGATATTGCCTTGTGGAAGTTTGAGACAACTAAGTACTACTGTACTATCATTGATGCTCCTGGTCACAGGGATTTTATTTAG 156 0.3974 MNKRSFKYVWVLDKLKAERERGITIDIALWKFETTKYYCTIIDAPGHRDFI* 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3609 51 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 51 - -
Psa6g3609 51 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Psa6g3609 51 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Psa6g3609 51 Gene3D - 1 51 IPR027417 -
Psa6g3609 51 PANTHER TRANSLATION FACTOR 1 51 - -
Psa6g3609 51 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 51 IPR027417 -
Psa6g3609 51 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 13 28 IPR031157 -
Psa6g3609 51 Pfam Elongation factor Tu GTP binding domain 9 51 IPR000795 GO:0003924|GO:0005525
Psa6g3609 51 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 51 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3609 Psa-Chr6 305731637 305731792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3609 1 51 Eukaryotic Initiation Factors Gene Family AT1G07930 96.078 1.43e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3609 K03231 - dcr:108218754 109.383