Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3608 ATGATTACTGGAACATCACAAGTTGATTGTGCTGTTCTCGTAATTGATTCCACTACTGGTAGTTTTGAGGCTGGTGAAGAACCAAAGATTGTTGTAGCTATAATTGATCTTTTTCACTTGTTTCCTCCCGCTACTTCTAAGTTCCTCGATGAACTTATAACCATGACAATTGATTTGGAAGGAGCTTTTCCTCCCGGAAAAGTATACAGTGAAATAAATAGTCCATACCCCCTTCCAATTACAAAGTTTTTAAATCGATATGCACCTATTGCGGTTGATTATTTTCTTGCTCGATTAAGTGAACCAAGGATGGAACCGAATCGTACAGGTCTTAGCATGAGCAACAAGCTTATTTTGATTGACTTGAAGGGATTTTCTAAGCTAAGTCACTTGATTAAGATAGCTCAAGACAACAGCACAACTAGCAAGTTTGTCGAAGCAGACTGCCGGACTACAATGTTCTTCGCCACAGCAGATACAAGAGTTGTTCTCATTAAATTGGCATTTCGAATATTGAGTACGGTAATACTGGATGCATTTCACGTTTCCAAGAAGCAGAGGTTTGCAAAGGAGACCTTGGAGATTTCTACACCGTTGGCCAATCTTCTAGATTTGTGCACCTTACTGTGA 630 0.3952 MITGTSQVDCAVLVIDSTTGSFEAGEEPKIVVAIIDLFHLFPPATSKFLDELITMTIDLEGAFPPGKVYSEINSPYPLPITKFLNRYAPIAVDYFLARLSEPRMEPNRTGLSMSNKLILIDLKGFSKLSHLIKIAQDNSTTSKFVEADCRTTMFFATADTRVVLIKLAFRILSTVILDAFHVSKKQRFAKETLEISTPLANLLDLCTLL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3608 209 Pfam Tra1 HEAT repeat ring region 20 104 IPR046805 -
Psa6g3608 209 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 20 103 - -
Psa6g3608 209 SUPERFAMILY HD-domain/PDEase-like 143 203 - -
Psa6g3608 209 Gene3D Hypothetical protein af1432 120 208 - -
Psa6g3608 209 PANTHER PHOSPHOTRANSFERASES/INOSITOL OR PHOSPHATIDYLINOSITOL KINASE 20 103 - -
Psa6g3608 209 Pfam HD domain 123 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3608 Psa-Chr6 305729991 305731633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3608 1 25 Eukaryotic Initiation Factors Gene Family AT1G07930 88.000 4.24e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3608 K08874 - gmx:100819389 145.976