Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa6g3608 | ATGATTACTGGAACATCACAAGTTGATTGTGCTGTTCTCGTAATTGATTCCACTACTGGTAGTTTTGAGGCTGGTGAAGAACCAAAGATTGTTGTAGCTATAATTGATCTTTTTCACTTGTTTCCTCCCGCTACTTCTAAGTTCCTCGATGAACTTATAACCATGACAATTGATTTGGAAGGAGCTTTTCCTCCCGGAAAAGTATACAGTGAAATAAATAGTCCATACCCCCTTCCAATTACAAAGTTTTTAAATCGATATGCACCTATTGCGGTTGATTATTTTCTTGCTCGATTAAGTGAACCAAGGATGGAACCGAATCGTACAGGTCTTAGCATGAGCAACAAGCTTATTTTGATTGACTTGAAGGGATTTTCTAAGCTAAGTCACTTGATTAAGATAGCTCAAGACAACAGCACAACTAGCAAGTTTGTCGAAGCAGACTGCCGGACTACAATGTTCTTCGCCACAGCAGATACAAGAGTTGTTCTCATTAAATTGGCATTTCGAATATTGAGTACGGTAATACTGGATGCATTTCACGTTTCCAAGAAGCAGAGGTTTGCAAAGGAGACCTTGGAGATTTCTACACCGTTGGCCAATCTTCTAGATTTGTGCACCTTACTGTGA | 630 | 0.3952 | MITGTSQVDCAVLVIDSTTGSFEAGEEPKIVVAIIDLFHLFPPATSKFLDELITMTIDLEGAFPPGKVYSEINSPYPLPITKFLNRYAPIAVDYFLARLSEPRMEPNRTGLSMSNKLILIDLKGFSKLSHLIKIAQDNSTTSKFVEADCRTTMFFATADTRVVLIKLAFRILSTVILDAFHVSKKQRFAKETLEISTPLANLLDLCTLL* | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa6g3608 | 209 | Pfam | Tra1 HEAT repeat ring region | 20 | 104 | IPR046805 | - | |
Psa6g3608 | 209 | PANTHER | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED | 20 | 103 | - | - | |
Psa6g3608 | 209 | SUPERFAMILY | HD-domain/PDEase-like | 143 | 203 | - | - | |
Psa6g3608 | 209 | Gene3D | Hypothetical protein af1432 | 120 | 208 | - | - | |
Psa6g3608 | 209 | PANTHER | PHOSPHOTRANSFERASES/INOSITOL OR PHOSPHATIDYLINOSITOL KINASE | 20 | 103 | - | - | |
Psa6g3608 | 209 | Pfam | HD domain | 123 | 204 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa6g3608 | Psa-Chr6 | 305729991 | 305731633 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa6g3608 | 1 | 25 | Eukaryotic Initiation Factors Gene Family | AT1G07930 | 88.000 | 4.24e-08 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa6g3608 | K08874 | - | gmx:100819389 | 145.976 |