Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3598 ATGAACAAGCGTTCATTCAAGTATGTTTGGGTGCTTGACAAGCTCGAGGCTGAAAGGGAAAGAGGTATCGCTATTGATATTGCCTTGTGGAAGTTTAGGACAACTAAGTACTACTGTATTGTCATTGATGCTCCTGGTCGCAGGGATTTTATTAAGAACATGATTACTGGAACATCACAAGCTAATTGTGCTGTTCTCGTAATTGATTCCACTAATAGTGGTTTTGAGGCTGGTGAAGAACCAAAGATTGTTATAGCCATAATTGATCTTTTTCACTTGTTTCCTCCCGCTACTTCTAAGTTCCTCGATGAACTTATAACCATGACAATTGATTTGGAAGGAGCTCTTCCTCCTGGACAAGTATACAGTGAAATAAATAATCCATACCGCCTTCCAATTACAAAGTTTTTAAATTGA 417 0.3837 MNKRSFKYVWVLDKLEAERERGIAIDIALWKFRTTKYYCIVIDAPGRRDFIKNMITGTSQANCAVLVIDSTNSGFEAGEEPKIVIAIIDLFHLFPPATSKFLDELITMTIDLEGALPPGQVYSEINNPYRLPITKFLN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3598 138 Pfam Tra1 HEAT repeat ring region 73 138 IPR046805 -
Psa6g3598 138 Gene3D - 1 98 IPR027417 -
Psa6g3598 138 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 78 - -
Psa6g3598 138 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Psa6g3598 138 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Psa6g3598 138 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Psa6g3598 138 Pfam Elongation factor Tu GTP binding domain 10 72 IPR000795 GO:0003924|GO:0005525
Psa6g3598 138 PANTHER TRANSLATION FACTOR 1 78 - -
Psa6g3598 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 83 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3598 Psa-Chr6 304956390 304956935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3598 1 78 Eukaryotic Initiation Factors Gene Family AT1G07930 87.179 3.79e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3598 K03231 - mus:103986704 145.206