Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3588 ATGGTGAAGCTTTTCTGGGTTACCATTGTAATAGGACTTGTTTTCATCAAATGGGTTGATGCATATCACATCAATGAAACTGAACTCTCTATCTTAGAAGCTCATGAAGGTTATTCTTTTTCCAACCTTGTGAATCAGCCTCGCATGGTGGGAATCACCCTTATTCAATCTGCTGCTGCTAAAGGAGCTGTTTGCTTGGATGGAACATTGCCTGCTTATCATTTGGACCGCGGATACGGATCGGGAGCAAACAGCTGGCTTGTTAATTTAGAGGGAGGTGGATGGTGTAATAACGTTAGAACATGCGTCTATCGCAAGACAACAAGGCGTGGATCATCAAATTTCATGGAGAAGGCGATACCTTTTACGGGAATAATGAGCAATAATGCTCAACAGAATCCAGATTTTTTTAACTGGAATAGAGTGAAAATTCGTTACTGCGATGGTGCCTCTTTTACCGGTGATAGTGAAGATAGGGCCGCGCGACTGCACTTCAGAGGACAACGCATTTGGTTGGCTGCAATCGAAGAATTGATGTCAAAAGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCGGCTGGTGGTCTAGCTACTATTTTACACTGCGATGAATTTCGAGCTCTACTCCCGAGGACTACCAGAGTGAAGTGTCTTAGCGATGCTGGTTTATTTCTTAACGTCGTTGATGTAGCTGGCGGGCGTACCCTCGGGAATTTTTTCAATGGTGTTGTAACCCTACAGGGTGCACAGAAGAATCTTCCACGCGCTTGTGCTAATCATCTTGATCCTGCCTCGTGCTTCTTTCCTGAAAATGTGATTTCCGGTATCAGAACTCCGCTATTCATTCTTAATACAGCCTATGACTCATGGCAGATCCAATCAAGCTTAGCTCCTCCAGCAGACGATCCCCGCGGTTATTGGCATGATTGCCGATTAAACCATGCTAAATGTACCGGTTCACAAATGCAGTTTCTTCAAGGATTCAGGAATCACATGCTGAATGTTGTTAGAGGGTTCTCAAGATCAAATCAAAATGGATTGTTCATAAATTCATGCTTTGCTCACTGCCAATCTGAGAGACCAGACACATGGTTTGCTGACAACTCTCCTGTCATTGGAAACAAGGCAATTGCTCTGGCCGTCGGAGACTGGTATTTTGATCGAGCCGCTGTTAAGGACATTGACTGTCCTTACCCTTGTGATAACACATGCCACCATCTAGTTTTCAGATGA 1242 0.4444 MVKLFWVTIVIGLVFIKWVDAYHINETELSILEAHEGYSFSNLVNQPRMVGITLIQSAAAKGAVCLDGTLPAYHLDRGYGSGANSWLVNLEGGGWCNNVRTCVYRKTTRRGSSNFMEKAIPFTGIMSNNAQQNPDFFNWNRVKIRYCDGASFTGDSEDRAARLHFRGQRIWLAAIEELMSKGMRFAKQALLSGCSAGGLATILHCDEFRALLPRTTRVKCLSDAGLFLNVVDVAGGRTLGNFFNGVVTLQGAQKNLPRACANHLDPASCFFPENVISGIRTPLFILNTAYDSWQIQSSLAPPADDPRGYWHDCRLNHAKCTGSQMQFLQGFRNHMLNVVRGFSRSNQNGLFINSCFAHCQSERPDTWFADNSPVIGNKAIALAVGDWYFDRAAVKDIDCPYPCDNTCHHLVFR* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3588 413 PANTHER PECTIN ACETYLESTERASE 4 412 - -
Psa6g3588 413 PANTHER NOTUM-RELATED 4 412 IPR004963 GO:0016787
Psa6g3588 413 Pfam Pectinacetylesterase 46 392 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3588 Psa-Chr6 303469585 303473440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3588 1 413 Carbohydrate Esterase AT1G57590 64.269 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3588 K19882 - gmx:100788448 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3588 6 303469585 303473440 Psa6g3588 6 303469585 303473440 ECH