Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3525 ATGGGCATTAACGTAAATTCAGATTCAAAGCCGAAAACAGTTGAGATCAAAGAGCTGAAATTCACTTATCCTGGAATCGACGGCCATCCTCCACCAGGCTCCAAACCTCTCATACAAGACTTCTCTCTCAACCTCTTCTCCGGTGATCGGTGCCTTCTCGTCGGATCCAATGGTGCCGGAAAGACTACAATTCTGAAGATATTAGGAGGGAAACACATGGTGGAGCCTGAAATGGTTCGTGTTCTTGGAAGATCGGCTTTTCATGATACAGCTTTGGAATCTTCTGGTGATTTATGTTATCTTGGTGGTGAGTGGAGAAGAGATGTTGCTTTTGCTGGTTTTGAAGTTCCAATACAGATGGACATTTCTGCTGAGAAAATGATATTTGGTGTGGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTAATCAAGGTATTAGATATCAATCTTTCGTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTTAAGGTTCTTCTGTTGGATGAGATAACGGTCGACCTTGATGTTCTAGCCAGAGCTGACCTTCTGAAGTTTCTAAGAAAAGAATGTGATGAGAGGGGTGCCACAATTATATATGCAACACATATATTTGACGGTCTTGACGATTGGCCAACAAATATTGTTTATGTAGCTCATGGAAGGCTGCAATTAGCAATGCCCATAGAGAAAGTCAAAGAAATTAGCAAACTGTCACTAATGAGAACGATAGAAGCTTGGCTACGAAAGGAACGAGATGAAGATAGAAGAAAAAGGAAAGAAAACAAGGCGGTTGGCCTTCCTGAATTTGAAAAGCAAGTTGATGGAAGTCGTGTAGTTGGTGGGGATCCTGCACGAGCTTCAGTTCGAGTTACTAATAATGGCTGGGCCGCAGGCCGGTTACATTCCACCATTGCTGGCGAGGAAAACTTCGTCCTAAGCTCAAACCGAGTATTGAGGGGGTAA 1002 0.4301 MGINVNSDSKPKTVEIKELKFTYPGIDGHPPPGSKPLIQDFSLNLFSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTALESSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECDERGATIIYATHIFDGLDDWPTNIVYVAHGRLQLAMPIEKVKEISKLSLMRTIEAWLRKERDEDRRKRKENKAVGLPEFEKQVDGSRVVGGDPARASVRVTNNGWAAGRLHSTIAGEENFVLSSNRVLRG* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3525 333 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 12 332 - -
Psa6g3525 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 248 IPR027417 -
Psa6g3525 333 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 12 332 - -
Psa6g3525 333 SMART AAA_5 47 234 IPR003593 -
Psa6g3525 333 Gene3D - 9 287 IPR027417 -
Psa6g3525 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 257 IPR003439 GO:0005524
Psa6g3525 333 Pfam ABC transporter 39 184 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3525 Psa-Chr6 298474279 298477496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3525 14 211 Calmodulin-binding Proteins AT2G36910 24.651 1.79e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3525 K12608 - gmx:100782386 563.533