Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3511 ATGTATGCTCCGTCTACACGACGACATCGCATATCTTCCCTCAGCCGTAGAACACCGCGATCCATAAACCCTCAACTCCAAAACCTCCCTGAAACCATGTCCGACAAGAAAACCACAGACCAATACGGCGTCCTCCTCTATTACAAGTACGTCGATATTCCAAACCTCGACGACCTCCTCACATTCTACCGCTCCAACTGCTCCTCCCTCTCCCTCCTCGGCCGCGTTCGCCTCTCTCCCCACGGCGTCAATGTCACCGTTGGCGGCAATTTACCCTCTTTGGAACAACACATCGAAGCACTCAAAGCCAACTGTACTCTATTTCACGGCACCGATTTCAAGCTTGCAACTTGTCATCATCCGTTAAACGACGACGTTGCTAAGGAGTGTGGTTTCACTTCACTCTCAATTCGTATTGTCAAGGAACTGGTTACTCTCAGTTCTCATCCACTGTTAAAGTCACCAGAAATCTCAAATGCTGGAAGACATTTATCAGCACTTGAGTTCCATTCTACACTTCACAATGCTAATAAGGAGAGTCCAGAAAACGGCCTTGTTTTACTTGATGCAAGGAATCTATATGAAACAAGGATAGGGAAATTTCATGCACCAAATGTTGAAACTTTGGATCCACAGGTTAGGCAATACAGTGATTTCTCCTCGTGGATAGATGATAGAAGCGAGCAATTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCAGCATATATTAAGTCAAAAGGTGCTGGGTTTGAGAACGTGTTTCAGTTATTTGGCGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTTTTTGATCATCGGATATCAGTTGGAGGTTCAGAGGCTAGTAGTACAATTGGTGCCTGTCTTATTTGTCAATGTTCCTTTGACGATTACTCTTCACGTTGTCGATGTACTTATTGCCGAATGCTTGTCTTGGTTTGTGAGAGTTGCCAGAACGAATCTCCACTGTACATTTGTGAGCTATGCCAAAAACAAGGCAAGGCTGTTGGGTCAAAGCAGTTAAATGAGAGCGATGATTCAAAAAAATCATTACAAGGTGTCGAGTTCCAGGATTTTTCTTCAGATACTATGCTCTTGCCTCAGGAGCTTAGGGGAGATGACGTAAGAACCTCAAGCAAACTAAGAATCTTATGCTTGCATGGGTTTCGGCAGAATGCTTCCAGTTTTAAGGGAAGAACAGCATCCTTAGCCAAAAAGCTCAAGAAAATTGCTGAATTTGTTTTTATAGACGCACCTCACGACGTGCCCTTCATTTATCAATCACCTGTTCCAGTGCCCCATGTGAATGGGGCATCTTCCTCTTTGCAAGCAAGTCCTCCTCCACCTTTCGAGAATTGTAAGAAGAAGTTTGCATGGTTTGTGGCACCCAATTTTGATGGAAGTAGTGGTGTTGATTGGAAAGTAGCAGATGGTCCATTTGATCCACTTCAATACCAGCAGCAAACTGATGGATATGATATTTCAATATCACACTTAGAGAATGTGTTCTCCCAAGAAGGGCCATTCGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGACTGCCGTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAAATTTGTAGTCTTGTGTTCAGGCTTTGCTCTCAATTTGAAGGAGATGGAGTGTAGCCCTATCAAGTGCCCTTCTCTTCATATTTTTGGCAATGAACATGGTCAAGACAGACAGATAGCCAACCAAGCAAGCAAGGAACTTGCTTCTCTATACGACGGTAGTTGTTCTGTGATCGTTGAACATGACTGTGGTCACATAATTCCAACTCGGTCCCCATATATTGACGAGATCAAGGCTTTCCTTGGGCGGTTTCTGCAAGATGTCTAG 1938 0.4355 MYAPSTRRHRISSLSRRTPRSINPQLQNLPETMSDKKTTDQYGVLLYYKYVDIPNLDDLLTFYRSNCSSLSLLGRVRLSPHGVNVTVGGNLPSLEQHIEALKANCTLFHGTDFKLATCHHPLNDDVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSALEFHSTLHNANKESPENGLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDRSEQLKGKNILMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGGSEASSTIGACLICQCSFDDYSSRCRCTYCRMLVLVCESCQNESPLYICELCQKQGKAVGSKQLNESDDSKKSLQGVEFQDFSSDTMLLPQELRGDDVRTSSKLRILCLHGFRQNASSFKGRTASLAKKLKKIAEFVFIDAPHDVPFIYQSPVPVPHVNGASSSLQASPPPPFENCKKKFAWFVAPNFDGSSGVDWKVADGPFDPLQYQQQTDGYDISISHLENVFSQEGPFDGILGFSQGAAMTAVISAQQEKLKGKMDFKFVVLCSGFALNLKEMECSPIKCPSLHIFGNEHGQDRQIANQASKELASLYDGSCSVIVEHDCGHIIPTRSPYIDEIKAFLGRFLQDV* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3511 645 SUPERFAMILY alpha/beta-Hydrolases 397 643 IPR029058 -
Psa6g3511 645 Pfam UPF0176 acylphosphatase like domain 43 142 IPR040503 -
Psa6g3511 645 Gene3D - 153 308 IPR036873 -
Psa6g3511 645 Pfam Rhodanase C-terminal 283 349 IPR022111 -
Psa6g3511 645 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 35 641 IPR020936 -
Psa6g3511 645 SMART rhod_4 171 278 IPR001763 -
Psa6g3511 645 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 151 295 IPR036873 -
Psa6g3511 645 Gene3D alpha/beta hydrolase 396 644 IPR029058 -
Psa6g3511 645 Pfam Serine hydrolase (FSH1) 397 633 IPR005645 -
Psa6g3511 645 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 35 641 - -
Psa6g3511 645 MobiDBLite consensus disorder prediction 16 34 - -
Psa6g3511 645 Gene3D - 31 144 - -
Psa6g3511 645 MobiDBLite consensus disorder prediction 1 34 - -
Psa6g3511 645 ProSiteProfiles Rhodanese domain profile. 181 281 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3511 Psa-Chr6 297526950 297532000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3511 40 642 Sulfurtransferasese or Rhodanese AT1G09280 63.591 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3511 - - mtr:MTR_1g084180 1172.53