Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3507 ATGGATTCATTCGAACCATCACACACTTTGCAAGAATCCAATCACAAGAAACGCCGCAAAATCGGAGATATAACCGCCGATCAAAATTCCCTCACTCTTATGCGATGGAGATCTGAATCAGACCAGAACAACTACTCCAAAAAACTAATCGAAGCTCTCAGCCGGATCAATTCCCCGGCAACCACCAAACCTAGAGCCGCCGGTCAAGTCCGCGAAACCGCCGATCGAGTCCTCGCCACATCAGCCAAAGGAAGAACACGCTGGAGCCGCGCGATCCTCGGAAAATGGAAGAAACTCCGTAGACATCACAAGAAAGTCAAGAAAGCTGCAAACGGATTGAACAGAGCCGGGATCGTAAAACAGAGGATGACGAGACGGTTACCGGCTGTGCAGAAGAAAACGCGCGTTCTCGGCCGGTTGGTTCCCGGTTGCCGGAAAGTACCTTTACCGAACCTTCTAGAAGAAGCTACTGATTATATCTCTGCCTTGGAGATGCAAGTGCGTGCTATGACTGCTCTTGCCGAGCTTCTCGCCGGTCGAACATCGGCTGGACTCGCCGGTCATGCGTTGAGTTGA 576 0.5139 MDSFEPSHTLQESNHKKRRKIGDITADQNSLTLMRWRSESDQNNYSKKLIEALSRINSPATTKPRAAGQVRETADRVLATSAKGRTRWSRAILGKWKKLRRHHKKVKKAANGLNRAGIVKQRMTRRLPAVQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGRTSAGLAGHALS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3507 191 MobiDBLite consensus disorder prediction 9 23 - -
Psa6g3507 191 PANTHER TRANSCRIPTION FACTOR BHLH150 11 190 - -
Psa6g3507 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 180 IPR036638 GO:0046983
Psa6g3507 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 163 IPR011598 GO:0046983
Psa6g3507 191 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 190 IPR044660 GO:0006355
Psa6g3507 191 CDD bHLH_AtIBH1_like 119 174 IPR044549 GO:0006355
Psa6g3507 191 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3507 Psa-Chr6 297279956 297282795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3507 1 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 42.553 2.98e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3507 - - aprc:113873135 228.794