Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3498 ATGGAATGGAACAAAGTTGTTACAACCGGTGAAAAACCAGGTCCTAGAGATAGTCATAGTGCAGTTCTTGTAGGGCACAGAATGATAGTTTTTGGTGGTACAAATGGGTTTAAGAAAGTGAATGAAACTCATATACTTGATCTTTATACCAAAGAATGGATTCGGCCTAAATGCGAAGGGACGCCACCTTCGCCGAGGGAAAGTCACACGGCGACTCTTGTTGGTGGTGAGAGGCTAGTGATTTTTGGTGGTAGTGGAGAAGGTGATGCAAATTATTTAAATGATTTGCATATTTTAGACCTTAGAACTATGAGATGGAGTGAGTTTGCTGAGGTGAATGGTGATTTACCTGTTCCTAGAGATAGTCATTGCACTGTTGCTGTTGGGAATAAGCTTATTGTTTATGGTGGAGATAGTGGTGATATGTATCATGGTGATGTTAGTTTGCTTGATATGGAAACAATGACTTGGATTAGGATGAAAAATCAAGGTTCTTCTCCGGGAGTCAGGGCAGGTCATGCAGCAGTGAATATCGGAACTAAGGTATACATCATTGGAGGGGTTGGAGATAAACGATATTGCAACGACATTTGGGTGTTTGACATACACACTTGTTTATGGACTCAACTTGATATAAATGGTCAACAGCCACAAGGGAGATTTTCTCATACAGCCGTTGTTGCAGACAACGATATTGCCATATATGGCGGGTGTGGAGAAGATGAACGTCCTTTGAATGAATTGTTAGTGTTGCAGCTTGAAGCAGAACATCCAAATGAACATAATAGAGTATCTAGGTGCAAAGTTTTTGGAAATTATTGGAATCAAGAAAATAAGACCATCCTTGCGGGTGAAGCAGAAACCAACTCGAAAATTCCGCGCATTGGGAATAATATAGAAGTCTTGCGAAAATGGGGTTATGGAGTTGCATCGGAAAAAGCGCAACCTTATCAGTTTGATTCAGGAACTTCGCAGCAGAAGAGGAGAAGAATTGCTGCTACGAAGGTGTGGGATGTTGATTCAGAACAAGAAGAACATTCTCTTTCATTGTCTCAGCATTCATCTCCGTCTCAATCTGATCAAGAACAGACACCAGGTCAAAAACCAAATGCTTCCGTCATGGATTCTCAGTGTTATCATCGAGTCAAACTCGTCAATAAAATTTCAACCGCTTGCGAGCCTATCAATCTCTCGAGTAACAAGAGATTTCTGAAGAATTGCACACAAATAAGTCAACAAGATCTTCGTGCAATGGATCATCAACCAAAGCAAGAGCAATATCTTCATGTTGACGAGAACAAAAAAGGAACTCGACAATACCAAGCTGTTGAGCCGAGGCCAGCTGGACGAGGACTCACTCAGCACCTGATTGGGGCTGAAGTTCGCGGAAAAGTTGATGGAGCCTTTGACTCGGGGTTTCTAATGACCGCAGTTGTAAACGGAAGACTTTTCCGAGGAGTTTTATTCGCACCAGGAGCAGGCATAACCGAACCAAATTATTCTACACCAAGTTTATTTCCATCCTCCACTCAACCGAACTCGAATCATATTGATAATTCGAGGGATACTCGGAAAGGAACAAATTGTTCACGTCTGGAGCCATGCTCCAGCTTAAGGCAACCACTCTATGCTCGAGTGTCTCCAATCTCGAATGGCGCTGCTCCTGTATCCTTACCTGAAGAACATAAAATCAGGAATGACTTACAAGGATTGGCTTTAACACTAGGAGGGCCTGGTAGTGGAAACCATGTTTGA 1755 0.4239 MEWNKVVTTGEKPGPRDSHSAVLVGHRMIVFGGTNGFKKVNETHILDLYTKEWIRPKCEGTPPSPRESHTATLVGGERLVIFGGSGEGDANYLNDLHILDLRTMRWSEFAEVNGDLPVPRDSHCTVAVGNKLIVYGGDSGDMYHGDVSLLDMETMTWIRMKNQGSSPGVRAGHAAVNIGTKVYIIGGVGDKRYCNDIWVFDIHTCLWTQLDINGQQPQGRFSHTAVVADNDIAIYGGCGEDERPLNELLVLQLEAEHPNEHNRVSRCKVFGNYWNQENKTILAGEAETNSKIPRIGNNIEVLRKWGYGVASEKAQPYQFDSGTSQQKRRRIAATKVWDVDSEQEEHSLSLSQHSSPSQSDQEQTPGQKPNASVMDSQCYHRVKLVNKISTACEPINLSSNKRFLKNCTQISQQDLRAMDHQPKQEQYLHVDENKKGTRQYQAVEPRPAGRGLTQHLIGAEVRGKVDGAFDSGFLMTAVVNGRLFRGVLFAPGAGITEPNYSTPSLFPSSTQPNSNHIDNSRDTRKGTNCSRLEPCSSLRQPLYARVSPISNGAAPVSLPEEHKIRNDLQGLALTLGGPGSGNHV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3498 584 MobiDBLite consensus disorder prediction 505 530 - -
Psa6g3498 584 MobiDBLite consensus disorder prediction 348 373 - -
Psa6g3498 584 Pfam Kelch motif 66 120 - -
Psa6g3498 584 SMART kelc_smart 181 230 IPR006652 GO:0005515
Psa6g3498 584 SMART kelc_smart 131 180 IPR006652 GO:0005515
Psa6g3498 584 SMART kelc_smart 78 130 IPR006652 GO:0005515
Psa6g3498 584 SUPERFAMILY Kelch motif 4 256 IPR015915 GO:0005515
Psa6g3498 584 Gene3D - 162 364 IPR015915 GO:0005515
Psa6g3498 584 PANTHER OS01G0300900 PROTEIN 1 582 - -
Psa6g3498 584 Pfam Galactose oxidase, central domain 15 57 - -
Psa6g3498 584 Pfam Galactose oxidase, central domain 170 217 - -
Psa6g3498 584 Pfam Galactose oxidase, central domain 219 254 - -
Psa6g3498 584 PANTHER KELCH REPEAT DOMAIN 1 582 - -
Psa6g3498 584 MobiDBLite consensus disorder prediction 342 373 - -
Psa6g3498 584 Gene3D - 1 161 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3498 Psa-Chr6 296669179 296671757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3498 52 254 Acyl Lipid Metabolism Gene Families AT3G05420 32.558 2.43e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3498 K20285 - gmx:100787222 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2892 5 219886325 219889644 Psa6g3498 6 296669179 296671757 PCT