Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3492 ATGGCGACAGAGCCAGCTTTTCCTTTCTCAATTGTATCCGTTGTTGAAGACGTTATTCAAAAACATGGAAGTAGTTTAAGCGATATCAATTTGGCTACAAGAAAAGCTCAAGAAGCTTCGTCAAGAAGGAATGAAGCAGCTACGTGGCTGCGAAATACAGTTGGAAATGTTGGAGGAAAAGACATGGTGGATGAACCTTCTGAACAAGATTTCAGAATTGCATTGCGTAGTGGCATTATCCTTTGCAATGCTCTCAACAAAATTCAACCTGGAGCTGTTCCCAAGGTAGTTGAAGCCCCAAGTGACATTGATGATATTCCTGATGGGGCAGCATTATCTGTTTATCAATACTTTGAAAATGTAAGGAACTTTCTAGTAACTGTGGAGGAGATGGGGCTTCCAACATTTGAAGCTTCTGATTTGGAGGAGGGAGGGCAATCCTCAAGGATAGTGAATTGTGTTTTAGCTCTTAAATCGTATAGTGAATGGGAAATGGGAGGTAAAAATGGATTGTGGAAATATGGTGGGAATCCAAAACCACCTAGCTCTGAGAAACCAGTTGTGAGGAAACGCTCAGAACCATTTACGAGGTATTTCTCAAGGGCTAAGTCAATAGGCGACAAAGATAGTTGGCTGGGTGATCACTCTTCAAACATTGATGCTGTACTGCATGATCACAGTGAAGGGAGTTCTATTCCTTCCGTGTATTCACTAGTTCGTGAAATTTTGCATGATAAGAAGCAAGAAGAAATTCCAATTATAATGGAATCTCTGCTTAGTAAAGTCATGGAGGAGTTTGAAAGTCGCGTGCTCACCATACAACAACAAACATCTAAAACACCCCGAGAAGATAAGGAACCATCTAAAGTATTGAATTCAAATTTAAAATCTGCTGATGGTGATGAAGAGATGGAAGAAAATGATGATGTAGAGCTCAAACAAAAGCAAAATGATGGCGTGAAGTACAATGGCAGTGAAGAATCAAGTAGCCAACTTTTGAAGTATCAAAACTGCCAAATCATAATTCAAAGGCAAAATGAAAACATCCAGGAATTGAAAATGATTGTTCATCAAACAAAAGAAGGAATGCACTGTCTACATAAAAAATACATGGAGGATTTTGTCTATCTAGCTAGGCATCTGAATAACATAGATTCTGCTGCTTCAGGATATCAGAAAGTTCTAGAAGAAAACCGCAAGTTATACAATCAGATGCAGGACTTGAAAGGTAATATCAGGGTGTACTGTAGAGTTCGCCCCTTAGAAGGGCAACCAAACAATTGTGGCATTGTCGGTAATGTAGAAGAAGAAAGTATTTCACTCATAATGCCTTCTAAGAATGGAAAAGGGGTGAAGAAGATATTTACTTTTAACAAAGTGTTTGGTCCTTCTGCAACTCAAGGGAAGGTTTTCTCAGATACACAACCTCTGATTCGTTCAGTTTTGGATGGATTCAATGTTTGTATATTTGCCTATGGGCAGACAGGCTCAGGAAAAACACACACAATGTCTGGACCAGACAATATTACCGAGGAAACAGTTGGTGTCAACTACCGCGCTTTGAGGGATCTTTTCAATCTTTCAGAACAACGGAAAGACACAATTCATTATGATATCTCTGTCCAAATGCTTGAGATATACAATGAGCAAAATCGGGCAGTTGGTGCTACTGCGATGAACACTCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTAGATCAGGAAATAGTCTACGTGGATGTATCCACCTAGTTGATTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTCATAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCTCTTTCCGCTTTAGGAGATGTAATTGCTTCCCTTGCCCAAAAGCAATCACACGTTCCTTACCGAAACAGTAAACTTACTCAGTTGCTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAAACTATTAGTACACTTAAGTTTGCTGAAAGGGTCTCCACTGTAGAACTAGGTGCCGCACGAGTTAATAAAGATAGCAGCGAAGTGAAGGTGCTGAAAGAACAGATTGCTAGTCTAAAGGCAACATTAGCAAGGATGAAGGATGGGGGAAAGTTGGAAAACTTTAAACAGCCTGCAAATAGCATCACCGACATGACAAGGTCAACATCTCAATTGCCTTTTGTTGTACCAACTAATTGGACTTCTGGAGGTCCTAAGTTACCAATAAATGATTCCAATAGCATTGAGGACCCTAAAATGGCTGCATCCAAGCTGAAAAGACTAAGCCTTGATCCTGAACACATATATAGGAATTTACCTACACGGCCACATTCACATGCTGGGGTAAATGTAAATGAGGATGACAGGGAATCAGTTTCTTGTAGAAGTATGAATACGGATGATGATAGCCTCACGGGACAGTCAGAAATAGAAAGCAAGCATTCTCCATTGTTAAGTCCCTCATATCTTTTAGACCCTTCAAAAATATGTATGGAGGTGGCCACCACACCCACAAATGACTTTGATGAGCTTGAGTTAGCAACTAGTGAATGTTCAGAATCAGACATGAGTTGGCAAGCTCATTCATCCAAAACAACTGCCATTTCCAGTGTGTTAGTGTCTAGACCGAAGAAATCAGTTCATCGCAAACAAACAAAGAACTTAGAAACCAGGAGTATGCTCCCGTCGTTCATTCCATCATCGCCAAGGAAACCACCTACGTTAAAGCATTCAAGTTCAATTGCTTCTAAAAGAAGAAATGGAAATGACAAGTGA 2832 0.4054 MATEPAFPFSIVSVVEDVIQKHGSSLSDINLATRKAQEASSRRNEAATWLRNTVGNVGGKDMVDEPSEQDFRIALRSGIILCNALNKIQPGAVPKVVEAPSDIDDIPDGAALSVYQYFENVRNFLVTVEEMGLPTFEASDLEEGGQSSRIVNCVLALKSYSEWEMGGKNGLWKYGGNPKPPSSEKPVVRKRSEPFTRYFSRAKSIGDKDSWLGDHSSNIDAVLHDHSEGSSIPSVYSLVREILHDKKQEEIPIIMESLLSKVMEEFESRVLTIQQQTSKTPREDKEPSKVLNSNLKSADGDEEMEENDDVELKQKQNDGVKYNGSEESSSQLLKYQNCQIIIQRQNENIQELKMIVHQTKEGMHCLHKKYMEDFVYLARHLNNIDSAASGYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLEGQPNNCGIVGNVEEESISLIMPSKNGKGVKKIFTFNKVFGPSATQGKVFSDTQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNITEETVGVNYRALRDLFNLSEQRKDTIHYDISVQMLEIYNEQNRAVGATAMNTRSSRSHSCLTVHVQGRELRSGNSLRGCIHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETISTLKFAERVSTVELGAARVNKDSSEVKVLKEQIASLKATLARMKDGGKLENFKQPANSITDMTRSTSQLPFVVPTNWTSGGPKLPINDSNSIEDPKMAASKLKRLSLDPEHIYRNLPTRPHSHAGVNVNEDDRESVSCRSMNTDDDSLTGQSEIESKHSPLLSPSYLLDPSKICMEVATTPTNDFDELELATSECSESDMSWQAHSSKTTAISSVLVSRPKKSVHRKQTKNLETRSMLPSFIPSSPRKPPTLKHSSSIASKRRNGNDK* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3492 943 MobiDBLite consensus disorder prediction 816 832 - -
Psa6g3492 943 Coils Coil 391 411 - -
Psa6g3492 943 Gene3D Kinesin motor domain 551 728 IPR036961 -
Psa6g3492 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 719 IPR027417 -
Psa6g3492 943 SMART kinesin_4 409 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 MobiDBLite consensus disorder prediction 273 326 - -
Psa6g3492 943 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Psa6g3492 943 SUPERFAMILY Calponin-homology domain, CH-domain 35 183 IPR036872 -
Psa6g3492 943 Coils Coil 694 721 - -
Psa6g3492 943 MobiDBLite consensus disorder prediction 800 815 - -
Psa6g3492 943 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Psa6g3492 943 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 550 - -
Psa6g3492 943 PANTHER KINESIN-LIKE PROTEIN KLP-3 550 938 - -
Psa6g3492 943 ProSiteProfiles Kinesin motor domain profile. 411 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 Gene3D Kinesin motor domain 353 550 IPR036961 -
Psa6g3492 943 MobiDBLite consensus disorder prediction 797 832 - -
Psa6g3492 943 MobiDBLite consensus disorder prediction 279 300 - -
Psa6g3492 943 PRINTS Kinesin heavy chain signature 484 505 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 PRINTS Kinesin heavy chain signature 557 574 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 PRINTS Kinesin heavy chain signature 588 606 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 PRINTS Kinesin heavy chain signature 637 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 Gene3D - 32 162 IPR036872 -
Psa6g3492 943 SMART ch_5 42 160 IPR001715 GO:0005515
Psa6g3492 943 MobiDBLite consensus disorder prediction 888 943 - -
Psa6g3492 943 Pfam Kinesin motor domain 550 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3492 943 PANTHER KINESIN-LIKE PROTEIN KIN-14H 550 938 - -
Psa6g3492 943 PANTHER KINESIN-LIKE PROTEIN KIN-14H 7 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3492 Psa-Chr6 296179618 296185571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3492 399 687 Calmodulin-binding Proteins AT5G65930 39.474 3.36e-64 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3492 K10406 - gmx:100808197 1135.94