Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3469 ATGAATAATAATAGAAAGTTGTTACAAACAAGTGTTGACAATGTAATGGTGACACAAAAAGTGGTTGTTAACCCTGATGGATCTGGAGATTTTGTCACCATAAATGATGCTGTGGATGCTGCACCTAATAAAACAGGCACCAACAATGGGTATCATGTGATTTATGTTGTCGCCGGGATTTATAGTGAGTATGTTTCTATTGCTAAGAACAAAGAGAATCTAATGATCATCGGAGATGGAATCGATCGGACTGTCATCACTGGAAGTCGTAGCGTGGTTGATGGTTGGACAACTTTTCAATCTGCAGCTTTTGCTGTAGTTGGCAAAGGCTTTGTTGCGGTGAACATGACATTTCGTAACACGGCGGGATCCAACAAGCATCAAGCAGTTGCAGTGAGAAACGGCGCAGACATGTCAGTTTTCTACAATTGTAGCTTCGAAGGTTACCAAGACACACTATACGCGCATTCCCTTCGACAATTCTACAAAAACTGCAACATTTACGGAACAGTTGATTTCATATTCGGCAACGCAGCAGCAGTATTCCAAAACTGTAACATATATCCGAGACTCCCAATGCAAAATCAGTTCAATGCAGTTACAGCGCAGGGAAGAACAGATCCTAACCAAAACACAGGGTTCTCAATATGGAACTGTTACATTGTAGCAGCTAGTGAATTAAGTGGTGTGAATAGTAGTTATAATGATATAAAGACATATTTGGGTAGGCCTTGGAAGGAGTATTCAAGGACAATTTATATGCAATGTTTTATAGATGGTTTGGTTGATCCTAAAGGTTGGGTTGAATGGTTAGGGGAATTTGCATTAAGTACATTGTATTATGGAGAGTTTGGTAATTGGGGAGAAGGTTCAGATACTAGTAATAGGGTGACATGGGAAGGGTACCATTTGATGGATGGAAAAGATGCTGATGAATTCACAGTTTACAAGTTTATTCATGGTGACAAGTGGTTGCCATTGACTGGAGTGCCTTTCAGAGCTGGGTTTCAGTGA 1014 0.4034 MNNNRKLLQTSVDNVMVTQKVVVNPDGSGDFVTINDAVDAAPNKTGTNNGYHVIYVVAGIYSEYVSIAKNKENLMIIGDGIDRTVITGSRSVVDGWTTFQSAAFAVVGKGFVAVNMTFRNTAGSNKHQAVAVRNGADMSVFYNCSFEGYQDTLYAHSLRQFYKNCNIYGTVDFIFGNAAAVFQNCNIYPRLPMQNQFNAVTAQGRTDPNQNTGFSIWNCYIVAASELSGVNSSYNDIKTYLGRPWKEYSRTIYMQCFIDGLVDPKGWVEWLGEFALSTLYYGEFGNWGEGSDTSNRVTWEGYHLMDGKDADEFTVYKFIHGDKWLPLTGVPFRAGFQ* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3469 337 Pfam Pectinesterase 21 322 IPR000070 GO:0030599|GO:0042545
Psa6g3469 337 PANTHER PECTINESTERASE 5 335 - -
Psa6g3469 337 Gene3D - 14 336 IPR012334 -
Psa6g3469 337 ProSitePatterns Pectinesterase signature 2. 167 176 IPR033131 -
Psa6g3469 337 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 5 335 - -
Psa6g3469 337 SUPERFAMILY Pectin lyase-like 20 334 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3469 Psa-Chr6 295173704 295175654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3469 12 336 Carbohydrate Esterase AT4G02330 65.231 2.81e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3469 K01051 - gmx:100810329 577.785