Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3452 ATGAGTTTTGGTTCTGAGTTTCTTATAATGATGTTGTTCATCATTATTATGACACTGTTGTTGATTCCTTTATCATCATTATCATCACAAAGTACTCACATTTTGAGTGTTGGAACCTTCCATGTTGATACTTTACAAGATAGTTATTTCTTGAAGGAGAAACATCAAGAGGTGGTGGTGAAAGTTGAGAAAATCTCCGGTTTAGATGAGAATGAAGAGAAACAAGGTTTTATAGTTGAAAAGTTTAGATCTTTGCTTGGTTTAAAGAGTTTTCACAAAGGGGTACATTCTAAATCCAATGGTGAAGAAGCTACATCACCTTCTCCAGCACCAGCACCGGCACCGGCACCGGCACCATCTGAAGGATTGCATTTGCATTCTCATTCTCATCATCAAAAACATCATTTTCATTGGAATCAACTACCTAAGAAGGTTCATCATGAGGATGATAGAGGCAGAAGAGATACAAGAATACTAGTAGCTGTTTTTGTTTCTGTTGGAGTTGCTTCCTTGGTTGGTGCTTTTGGTTTGATGTTATTCTGCAGGAAAAAATTCACAAATCACAAAAAGAAGAAACCAAAGAGAACAATGCCTATATCTAGCAGCAATAGCAAAGGAACAACAAAAGGTACTAGTTATCAAAATTCAGGGCTAGATCTGTTTTATCTTGATGCATTAGGTGAAGATATTGAACAACAAAATGTTTGTGGCTTGAAAAAGACTAGTGAGGAAATTGTTTCTGTTCATCAAGAGGTGGAAATGGAAAATTCTGATAAAATTGTTCATGAAGATTGTGATTCATCAGAGGATGAAAGCTTTCATTCTTTGGTTGATTCACAATCAAATTTGAGACTTTCTAATGCTTCTGCTTGTAGTAGTCTTAGTGACAAACAATCTCTGTTGTCACCTCAAAATTCATTTTCTTTGGTACAAAACAAAGAACCTAATTCTCCACAAAACTCAATCTCAAACACACATGAAGAGATTGAAACTTTTGTTTATTGTACAAAAACATCTACTTCCACTTCTCCTCCTCTTCCTCCTCCACCACCAACCCCTCCGCCGCCGCCGCCGACACCACCTTTGAAAATGCCACTCTTTTCTCTACATTCACTAACATCTTCATCTAGAATTTCATCTCACTCTCCACTTTCCTTAACATCTCATACTTTGTCTTCTCCTATAAATTCAGAAACTTCTTCAAGATCAAACCAAAGTCCTAAAAAAGATCCATTTTCTCCATCTCCTAGCCTTACAAAATCTCCTCCACCACCACCATGTCCTCCTCCATTTCCAAAAGGAAATAGCAACAACAACAAGGGCAAAACACCTCCTCCTCCCCCATATGAATTCCCTCAATCCCCACTTGGTAAAGATGGTACACCATTGGCTAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCTGCACCAAACCGCACAATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTTGATGAGGAAATGATTGAGTCACTTTTTGGATACAATTTTCAAAGTTCAATTAAAAATGATGAAAGTAAGAGCAAAACACCATCTCCAAGCAAGCATGTACTCGATCCAAAGAGGTTGCAGAACATAACTATACTCTCAAAAGCTCTAAATGCAACGGCCGAACAAGTATGTGATGCATTAATGCAAGGGAAAGGTTTGTGTTTGCAACAACTAGAGGCACTAGTGAAAATGGTACCTACCAAAGAAGAAGAGTCAAAACTCTTCAATTATAAAGGTAACATCAATGAATTGGGGTCCGCCGAAAAGTTTGTGAGAGCAGTGCTTTGTGTACCATTTGCTTTTCAAAGAGTAGAAACTATGCTTTATAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGAAACTCATTTTCAATGCTAGAGGTAATCATTTAG 1917 0.3756 MSFGSEFLIMMLFIIIMTLLLIPLSSLSSQSTHILSVGTFHVDTLQDSYFLKEKHQEVVVKVEKISGLDENEEKQGFIVEKFRSLLGLKSFHKGVHSKSNGEEATSPSPAPAPAPAPAPSEGLHLHSHSHHQKHHFHWNQLPKKVHHEDDRGRRDTRILVAVFVSVGVASLVGAFGLMLFCRKKFTNHKKKKPKRTMPISSSNSKGTTKGTSYQNSGLDLFYLDALGEDIEQQNVCGLKKTSEEIVSVHQEVEMENSDKIVHEDCDSSEDESFHSLVDSQSNLRLSNASACSSLSDKQSLLSPQNSFSLVQNKEPNSPQNSISNTHEEIETFVYCTKTSTSTSPPLPPPPPTPPPPPPTPPLKMPLFSLHSLTSSSRISSHSPLSLTSHTLSSPINSETSSRSNQSPKKDPFSPSPSLTKSPPPPPCPPPFPKGNSNNNKGKTPPPPPYEFPQSPLGKDGTPLAKLKPLHWDKVRAAPNRTMVWDKLRSSSFEFDEEMIESLFGYNFQSSIKNDESKSKTPSPSKHVLDPKRLQNITILSKALNATAEQVCDALMQGKGLCLQQLEALVKMVPTKEEESKLFNYKGNINELGSAEKFVRAVLCVPFAFQRVETMLYKETFDDEVVHLRNSFSMLEVII* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3452 638 MobiDBLite consensus disorder prediction 127 141 - -
Psa6g3452 638 MobiDBLite consensus disorder prediction 372 425 - -
Psa6g3452 638 MobiDBLite consensus disorder prediction 97 149 - -
Psa6g3452 638 MobiDBLite consensus disorder prediction 372 415 - -
Psa6g3452 638 MobiDBLite consensus disorder prediction 190 210 - -
Psa6g3452 638 Gene3D Formin, FH2 domain 457 638 IPR042201 -
Psa6g3452 638 SUPERFAMILY Formin homology 2 domain (FH2 domain) 469 635 - -
Psa6g3452 638 ProSiteProfiles Formin homology-2 (FH2) domain profile. 456 638 IPR015425 -
Psa6g3452 638 PANTHER FORMIN-LIKE PROTEIN 53 635 - -
Psa6g3452 638 Pfam Formin Homology 2 Domain 459 635 IPR015425 -
Psa6g3452 638 PANTHER FORMIN-RELATED 53 635 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3452 Psa-Chr6 294129468 294133791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3452 370 636 FH2 protein (formin) Gene Family AT3G25500 44.912 4.48e-51 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3452 - - gmx:100793761 551.592