Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3437 ATGAAAACTTTCGTAGCCGCCGCTCCCATTCTAGGCTTTTTTCTTCCTCCCTTCGAATGCCCACGCTTCTCTCTTTTATCTGATGATATGTGGTCCTGCATTCCGTACCATTCTGAGATGGCATTATCCGTTAGAGAAGGATTCCTTTTCAAAGACCCCTTTGTGAATGGTGGAGGCTTTGGTGCGATTCGTTCGGAGGCAAAATGCTGTGGCATTGGCTCTGTGTATCGCGTTGCTCTTGATGACGGTTTAGGTTATGTTGCAGTGAAAACAATAAGGGGGAATAGCAGAAAGTTAGACCAGAAGCTTGTAGACTCATTTCTTGCAGAAGTTGAAATACTGAGTAAAATTCGGCATAACAACATTGTGAAGTTGATGTGTTGTATCTCAAGTGATGATTTGCTACTACTTGCATATGGGTATCATGAACATCAGAGTCTTAATAGGTGGCTACAAAAAGAATAA 465 0.4215 MKTFVAAAPILGFFLPPFECPRFSLLSDDMWSCIPYHSEMALSVREGFLFKDPFVNGGGFGAIRSEAKCCGIGSVYRVALDDGLGYVAVKTIRGNSRKLDQKLVDSFLAEVEILSKIRHNNIVKLMCCISSDDLLLLAYGYHEHQSLNRWLQKE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3437 154 Pfam Protein kinase domain 72 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3437 154 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 70 153 - -
Psa6g3437 154 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 70 153 - -
Psa6g3437 154 SUPERFAMILY Protein kinase-like (PK-like) 71 153 IPR011009 -
Psa6g3437 154 Gene3D Transferase(Phosphotransferase) domain 1 63 154 - -
Psa6g3437 154 ProSiteProfiles Protein kinase domain profile. 49 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3437 Psa-Chr6 293585277 293585954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3437 71 152 Receptor kinase-like Gene Family AT5G25930 54.878 1.54e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa6g3437 Pkinase 4.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3437 - K00924 gmx:100785907 110.538