Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3436 ATGCTAGAAGCAACCATAGAACCCAAAGACAAAACTTTCAAAGATCTAGGGTTAGACGCACGCCTCATTCGCGCCTTATTGAAGAAAAAATGCGAGAAGCCTACTCCAATTCAAGAGCACACGATTCCACATATTCTTGAAGGTAAAGACGTCGTTGCTCGAGCCAAAACAGGTTCCGAGAAAACACTTGCGTACCTTATCCCTTTGCTTCATAACCTATTTACTAGTAATGTTGATAGGAAAAAGCTAGCGCCTAATGTTTTTGTTCTTGTTCCAACTACTGAACTCTGTCAACAAGTTCATTTGCTTGTTTTGATTTTTATTATTGTTCTCAACAATTTCCTTGAAACTAATCTTGAAAATTGA 366 0.3798 MLEATIEPKDKTFKDLGLDARLIRALLKKKCEKPTPIQEHTIPHILEGKDVVARAKTGSEKTLAYLIPLLHNLFTSNVDRKKLAPNVFVLVPTTELCQQVHLLVLIFIIVLNNFLETNLEN* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3436 121 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 11 39 IPR014014 GO:0003724
Psa6g3436 121 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 9 101 - -
Psa6g3436 121 Pfam DEAD/DEAH box helicase 35 101 IPR011545 GO:0003676|GO:0005524
Psa6g3436 121 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 42 121 IPR014001 -
Psa6g3436 121 Gene3D - 2 115 IPR027417 -
Psa6g3436 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 107 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3436 Psa-Chr6 293565484 293565849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3436 6 99 Eukaryotic Initiation Factors Gene Family AT3G19760 32.979 1.41e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3436 K14810 - gmx:100800749 134.806