Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3432 ATGTCAAACATCACAAGTTGTGATAGTGGAAGCTTCTCTACAGAGAATATCAGAGATCAAGATGGAGTTAAACATCATCAACAACAAAATGAAATACTTGGTCAATTTCATAGTCCACATTCTCATACTTCAACAACAACTACAACAAATAATAGCAATGGTTCCAACACTAATTTACAACCACCTCTTAAGAGAAAAAGGAACCTACCAGGAAATCCAGATCCAAGTGCTGAAGTGATAGCTTTATCACCAACAACACTAATGGCTACAAACCGATTCGTATGTGAAATATGCAACAAAGGTTTTCAAAGAGATCAAAATCTTCAATTGCACCGAAGAGGACACAACTTGCCATGGAAGCTTAAGCAGAGAACAACAAATGAAATTATAAAGAAGGTTTATGTTTGTCCTGAACCTTCATGTGTTCACCATAACCCTGCAAGAGCACTTGGGGATCTTACTGGTATTAAAAAGCACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAATGTGATAAGTGTTCTAAGAAATATGCTGTTCAATCTGATTGGAAAGCTCATTCTAAAATCTGTGGTACAAGGGAATACAAATGTGACTGTGGAACCATCTTTTCAAGAAGAGACAGCTTCATTACCCACCGAGCTTTCTGTGATGCATTAGCTGAAGAGAACAACAAAGCCAACGAAGGTTCAGTACAGTTATCAAACATGCAACACCAACAAATTCCAAATCTCGTTTCTTCAATATTACCAATGAACCAAAACAACTCACCAATCGTTGGAGCTTCAGAGTTCAATCTTTCAGATCACAAACATCCATTATCATCGCCTCACGATCTCATGTCAGTTCCTGTAAAGCCCTTCAACAGCAATATATTCACGAGAAGTCTTTCATCGTCAACTTCATCTCCTTCTCTTCAACTGAGTTCAAATAACTCACTCAACAACATCTTGGAAGAAAACGGTTCACTCCATTTGTCTGCAGCTGCAACCTCGCCTCACATGTCAGCCACTGCATTGTTACAAAAAGCAGCTCAAATGGGTGCAACCGTGAGTAGTAATAGTAATGCAGGTATGGTTATGACTGATAAAACAACCGTCGCTACAAACATGATGACGCCGCCGCCGTTATTCGGTATGGTGCAACAACAAGGACATTCTTTCATGAACCACTACATGCAACAGCAACAACAGCAACCTCAGTACATTAATAATAATTTCAATGGAAATGTGATGTTAAGTGGAGGAGGTGTTAATGGATCAATGAATGGAGTTGATATGTTTAATGCTATATTGGATCAAAGTAAGGCTTTATCGAAGATCATTGAACAGAACAATCAAACTCAAAGCATGAACAATGTTGGAGGAGGAGGAGGTGCATCGAGTAATATTATGAATATTGGTGGAAGTAAAGGAAGTGGTGGAGATGTAATGACACTGGATTTATTGGGGATAGGAGGAGGGGGTGCACATGGTAATTTCTATGGAGGAGGGGGTGCACAACAACAACAGCAACAAGCAGAAAGTGCTGCAGCAGCAGTAGCAGCAGATGAGGTTTGGAGAAATTGGTCAACCAAGAATGGAGGATTTGAAACCTTTTCAGCAACAAGCAACATTTGA 1620 0.3969 MSNITSCDSGSFSTENIRDQDGVKHHQQQNEILGQFHSPHSHTSTTTTTNNSNGSNTNLQPPLKRKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTTNEIIKKVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKANEGSVQLSNMQHQQIPNLVSSILPMNQNNSPIVGASEFNLSDHKHPLSSPHDLMSVPVKPFNSNIFTRSLSSSTSSPSLQLSSNNSLNNILEENGSLHLSAAATSPHMSATALLQKAAQMGATVSSNSNAGMVMTDKTTVATNMMTPPPLFGMVQQQGHSFMNHYMQQQQQQPQYINNNFNGNVMLSGGGVNGSMNGVDMFNAILDQSKALSKIIEQNNQTQSMNNVGGGGGASSNIMNIGGSKGSGGDVMTLDLLGIGGGGAHGNFYGGGGAQQQQQQAESAAAAVAADEVWRNWSTKNGGFETFSATSNI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3432 539 Gene3D Classic Zinc Finger 93 139 - -
Psa6g3432 539 MobiDBLite consensus disorder prediction 35 65 - -
Psa6g3432 539 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 28 512 - -
Psa6g3432 539 SUPERFAMILY beta-beta-alpha zinc fingers 92 189 IPR036236 -
Psa6g3432 539 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 28 512 - -
Psa6g3432 539 SMART c2h2final6 169 189 IPR013087 -
Psa6g3432 539 SMART c2h2final6 93 115 IPR013087 -
Psa6g3432 539 SMART c2h2final6 134 164 IPR013087 -
Psa6g3432 539 Pfam Zinc finger, C2H2 type 93 115 IPR013087 -
Psa6g3432 539 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Psa6g3432 539 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 115 IPR013087 -
Psa6g3432 539 MobiDBLite consensus disorder prediction 35 63 - -
Psa6g3432 539 Gene3D Classic Zinc Finger 148 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3432 Psa-Chr6 293463023 293466538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3432 55 374 IDZ Gene Family AT3G50700 55.587 5.74e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa6g3432 zf-C2H2 0.0055 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3432 - - gmx:100785295 616.69