Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3412 ATGATTACGATAGATATGTTACCCTCACCGCTTGATTCTTCAACTTCATTTCTAAACACAAGCACTATTGTTGCACTTTGCGTATTCTTTGCACTCCTCTGTGCTTGCATCATCGTAGGCCACCTTCTCGAAGAGAATCAATGGGCCAACGAATCCATCACTGCCCTCCTTCTTGGTTTGTGTTCTGGAGTGGTGGTGTTGTTGGTGACGAAGTTTCACAGTACCAAGATTCTAATATTCAATGAAGATTTGTTCTTTCTTTACTTGCTTCCACCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACTAGTATTCTTCTGTTTGGTGTCCTTGGAACAGTTATTTCTTTCTGTCTTATATCTCTTGGTGCCTTTCTACTCTTTAACGGGATTGGTATAACTAACCTCGGCATAAAAGATCACCTAGCCATTGGGGCCATACTGTCAGCAACTGACTCGGTTTGTACATTACAGGTTCTGAGTCAAGACGAAACACCTTTTCTTTACAGCATTGTATTTGGCGAAGGAGTAGTAAATGATGCCACATCCATTGTTCTTTTCAATTCAGTCCAAACACTTAACTTCAGCAGTATCAATGCTATTACAGCTTTGAAATTGTTGGGGACGTTCCTTTACCTCTTTTGCACTAGTACTGCTCTTGGCGTAATTATTGGCCTTTTAAGTGCTTATATTATTAAAACACTTTACTTTGGGAGGCACTCTACAGATCGTGAAGTTGCGCTTATGATGTTAATGGCATATCTGTCATATATGATTGCCGAGCTTATGAATCTCAGTGGAATTTTGACTATTTTCTTCTGTGGCGTTGTTATGTCACACTACACATGGCACAATGTTACAGGAAACTCGAGGACAACAACCAAGCACTCCTTTGCAACTCTCTCGTTTATAGCGGAAACCTTTATATTTCTATATGTTGGCATGGATGCTCTAGACATTGACAAATGGAAAAGAAGCAAAGCCAGGTAG 1014 0.3994 MITIDMLPSPLDSSTSFLNTSTIVALCVFFALLCACIIVGHLLEENQWANESITALLLGLCSGVVVLLVTKFHSTKILIFNEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTSILLFGVLGTVISFCLISLGAFLLFNGIGITNLGIKDHLAIGAILSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLNFSSINAITALKLLGTFLYLFCTSTALGVIIGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMIAELMNLSGILTIFFCGVVMSHYTWHNVTGNSRTTTKHSFATLSFIAETFIFLYVGMDALDIDKWKRSKAR* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3412 337 Pfam Sodium/hydrogen exchanger family 27 324 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa6g3412 337 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3412 337 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3412 337 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3412 337 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3412 337 Gene3D - 145 197 - -
Psa6g3412 337 PANTHER SODIUM/HYDROGEN EXCHANGER 11 334 IPR018422 GO:0006812|GO:0015299|GO:0016021
Psa6g3412 337 PANTHER SODIUM/HYDROGEN EXCHANGER 11 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3412 Psa-Chr6 291674552 291678554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3412 14 332 Antiporters AT3G05030 68.652 3.47e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3412 K14724 - ccaj:109808094 531.561