Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3397 ATGGCTGGAAGTAACCAACTCAACCCTAGCGATTCAAAGATGGTGGTTCCGTTGAACATGTGGGTTTTAATCTCGAATTTTAAGTTAGCATACAATCTTCTCCGTCGTCCTGATGGAACTTTCAACCGTGACTTGGCGGAGTTTCTTGATCGTAAAGTTCCGGCGAATGCAAACCCTGTGGATGGAGTGTTTTCTTTTGATGTGATTGTTGACAGGGAAACGAATCTCCTCACTCGAATTTACCGTCCTGTTGAGGGAGATGAAAGTCATGTGAACATTGTTGACCTTGAGAAGCCCGTCACTGCTGAGGTTGTACCTGTTCTTATGTTCTTCCATGGTGGAAGTTTTGCACATTCTTCAGCTAATAGTGCGATATATGATACTTTGTGTCGTCGATTGGTTGGTATTTGTAATGCTGTTGTTGTGTCTGTGAATTATAGGCGTGCACCTGAAAATAGGTACCCTTGTGCTTATGAAGATGGGTGGAAAGCTCTTAGATGGGTTAGTTCTAGAACTTGGCTGCAGAGTAAAAAGGATAACAAGGTTCAGATCTACATGGTTGGCGATAGCTCGGGCGGGAACATTGTGCACCATGTTGCTTTGAAGGGTATGGACTCTGGAATTCAGGTGTTGGGGAATATACTTCTCAACCCATTGTTTGGCGGGGAGGAAAGAACGGAATCTGAAAAGCGTCTCGATGGGAGGTACTTTGTTAGAGTGAAAGATAGAGACTGGTATTGGAGGGCTTTTCTTCCTGAAGGAGAAGACAGAGACCATCACGCGTGTAACCCTTTTGGTCCCAATGGTCAAAGCCTTGAAGGGGTTGTGTTTCCTAAGAGCCTTGTCGTGGTTGCTGGTTTGGATCTTGTTCAGGATTGGCAATTGGGGTATGCAAAAGGGCTTGAGAAAGCTGGACAAAACGTGAAGTTGCTCTTTCTGGAGCAAGCGACTGTCGGGTTTTACTTGCTTCCAAATAATGAACACTTCTCTGCTTTGATGGATGAGATAAAACATTTTGTGAGCTCTGACTGTTGA 1035 0.4454 MAGSNQLNPSDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGDESHVNIVDLEKPVTAEVVPVLMFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKALRWVSSRTWLQSKKDNKVQIYMVGDSSGGNIVHHVALKGMDSGIQVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPNGQSLEGVVFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATVGFYLLPNNEHFSALMDEIKHFVSSDC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3397 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Psa6g3397 344 SUPERFAMILY alpha/beta-Hydrolases 33 340 IPR029058 -
Psa6g3397 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Psa6g3397 344 PANTHER GIBBERELLIN RECEPTOR GID1C 2 340 - -
Psa6g3397 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 340 - -
Psa6g3397 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3397 Psa-Chr6 291091115 291094376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3397 1 344 Carbohydrate Esterase AT3G05120 74.203 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3397 K14493 - gmx:100815161 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3397 6 291091115 291094376 Psa6g3397 6 291091115 291094376 ECH