Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3396 ATGGAGTGCAACAAGGAAGAGGCTGTGAGGGCTAAGCAAGTCGCAGAGAGTAGAATGCAAAAGGGTGAATATGTAGAGGCTCTGAAATTTGCTATCAAGGCCAAAAAACTGTACCCGGATGTTGAAAACATTGCTCAGATACTTGCAGTTTGCGAGGTTCACAGTGCTGCACTGAACAAACTCTATAGGGCTGAAATGGACTGGTATGGAATTCTTCAGACAGAGAAACTCTCCGAAGAAGCAGTCATAAGAAAACAGTACAGAAGGCTGGCACTACTACTTCATCCCGATAAAAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATGGGGTGTTGAATGACCAAACAAAGCGAATTTTACATGATATGAAAACTACCTCATCATATGTACCATTTGGTGCCCCGAAAGCGGTTCCTACGCAGGTTCCACCAAATCCAGGGTCTACAAGTAAAGATGAAAAACCCCTTGGCGGTGGAAGTGAGGATACTTTTGTGCGGTCTACCCCGCGTATGAAAACATGTGATACTGGAGTTGGTAAGGATCATAAAGATGAAAAGAGTAAGAGTGCCTATGTTCCCGTGTCCAAACCAAAGGAGTCACAGGCCTCAAAGAATGTTGGAAGTAAGAGAGTGAGACAACCAGAACCAGATTCAAAAGAGAGATTCAACACTAGAAATAATGATGAAAATCAAGATCCTTCAAGGTTGAACGTTAGAAGGTCTTCCAGACAAAAGCAACATGTTTCATATGTGGAAAATCATGAAGATGAAAGTTATGATGCTACTTCCAAAAAGCCTCGTAAAACTGAGTCATTTAACAATGATGAAGTTGAGGAAAAGAACGTGTCTGAAGAAACAATTTTAAGGAATACTAGCAAAGATGAGCCTTCTCATGTTCAAGGAGAAAATGTCTTGGAGTCAGATCATGATCCTAGAAGGTTCAAAGAGCAAAACGGCTCTCCATTGAATTCAAATATTCCTTCTAGCCCAGAGATAATTTATTGTCCTGATACAGATTTCAATGATTTTGATAAGGACAAGGCTAAGGATTCTTTTGCTGTTAATCAATTATGGGCAATTTATGATACCACTGATGCTATGCCAAGATTTTATGCTCTTGTCAAGAAAGTAGCATCCCCTTTCAATTTGCATATTACATGGTTGGAAGCTGACCCATATGAGGACGACGAGGTGGATTGGAACAAGGCAGATTTGCCTATTGCTTGTGGTAAATTCAAACTTGCTAACACTCAGAAAACTACAGACCTTGGGATGTTCTCTCATCAGATTCAGTGTATAAAAGGAAATGACAAAAAATCTTTCATAGTGTATCCCAAAAAGGGAGAAACTTGGGCAATTTACAGTAATTGGGATATCAATTGGAGTTCTAATCCAGAAAATTTTCTTAAGCGTGAAATTGCTTATGTGGAAATCGAATCAGATTTTTCTAAGAATGTTGGCATTGAAGTATCTCTCCTAGGCAAAGTGAAAGGCTTTACGAGTCTGTTTGAGAAAACTGGAAAGAATGGAGAGAACACATTTTGTATTCTACCAAAGGAGCTATATAGATTCTCACATCAAATTCCTTCATACAAGATGAGTGGTGATGAAAGGGAAGGTGTTCCCAGAGGATGTTTTGAACTTGATCCTGCAGCTCTGCCAGCTGACATCTTGGAAGCTGATGAAGAATAG 1710 0.3988 MECNKEEAVRAKQVAESRMQKGEYVEALKFAIKAKKLYPDVENIAQILAVCEVHSAALNKLYRAEMDWYGILQTEKLSEEAVIRKQYRRLALLLHPDKNKFAGAEAAFKLIGEANGVLNDQTKRILHDMKTTSSYVPFGAPKAVPTQVPPNPGSTSKDEKPLGGGSEDTFVRSTPRMKTCDTGVGKDHKDEKSKSAYVPVSKPKESQASKNVGSKRVRQPEPDSKERFNTRNNDENQDPSRLNVRRSSRQKQHVSYVENHEDESYDATSKKPRKTESFNNDEVEEKNVSEETILRNTSKDEPSHVQGENVLESDHDPRRFKEQNGSPLNSNIPSSPEIIYCPDTDFNDFDKDKAKDSFAVNQLWAIYDTTDAMPRFYALVKKVASPFNLHITWLEADPYEDDEVDWNKADLPIACGKFKLANTQKTTDLGMFSHQIQCIKGNDKKSFIVYPKKGETWAIYSNWDINWSSNPENFLKREIAYVEIESDFSKNVGIEVSLLGKVKGFTSLFEKTGKNGENTFCILPKELYRFSHQIPSYKMSGDEREGVPRGCFELDPAALPADILEADEE* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3396 569 PRINTS DnaJ domain signature 69 87 IPR001623 -
Psa6g3396 569 PRINTS DnaJ domain signature 87 102 IPR001623 -
Psa6g3396 569 PRINTS DnaJ domain signature 103 123 IPR001623 -
Psa6g3396 569 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 132 - -
Psa6g3396 569 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 133 568 - -
Psa6g3396 569 Pfam Domain of unknown function (DUF3444) 336 543 IPR024593 -
Psa6g3396 569 SUPERFAMILY Chaperone J-domain 58 130 IPR036869 -
Psa6g3396 569 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Psa6g3396 569 PANTHER - 1 132 - -
Psa6g3396 569 PANTHER - 133 568 - -
Psa6g3396 569 Gene3D DnaJ domain 50 126 IPR036869 -
Psa6g3396 569 Pfam DnaJ domain 67 127 IPR001623 -
Psa6g3396 569 MobiDBLite consensus disorder prediction 137 336 - -
Psa6g3396 569 MobiDBLite consensus disorder prediction 216 322 - -
Psa6g3396 569 CDD DnaJ 67 120 IPR001623 -
Psa6g3396 569 SMART dnaj_3 66 123 IPR001623 -
Psa6g3396 569 MobiDBLite consensus disorder prediction 200 214 - -
Psa6g3396 569 MobiDBLite consensus disorder prediction 181 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3396 Psa-Chr6 291023584 291025590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3396 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.985 3.17e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3396 - - mtr:MTR_1g060440 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3396 6 291023584 291025590 Psa6g3396 6 291023584 291025590 ECH