Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3391 ATGGCTATTGAACTTGCTCTTATTGCTTCAAAGTTACAAAATTTATCCACTTCTGACCATGCCTCCATAGTTTCCATGAACTTGTTTGTGGCACTTCTATGCGCTTGTATTGTTCTTGGCCATCTTCTCGAGGAGAATCGGTGGATGAATGAATCCATCACTGCCCTTTTGATCGGAATTTGCACTGGTGTATTCATTTTGCTGCTAAGTGGTGGAAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCGCCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTCAACTTCATGACTATCACGTCGTTTGGTGCTATTGGCACACTAATATCTTGCTGTGTCATAACTTTGGGTGCTACACAAGCTTTTAAGAGGATGGATATTGGGCCACTGGAAGTGGGCGATTACCTAGCTATTGGAGCAATATTTGCCGCGACAGATTCTGTTTGCACGTTGCAGGTGCTAAATCAAGACGAGACACCTTTGTTGTATAGTCTTGTATTTGGAGAAGGTGTTGTGAATGATGCTACCTCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGATCTCAACCAACTTAATCCTTCAATTGCATTGCACTTTTTGGGCAACTTCTTCTATTTGTTTATAGCAAGCACTCTCCTCGGCGTTTTGACAGGTCTACTCAGTGCTTACGTTATTAAAAAGCTCTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTATATGCTGGCTGAGTTATTCTATCTGAGTGGCATTCTCACCGTATTCTTTTGCGGTATTGTCATGTCTCATTATACTTGGCATAATGTGACTGAGAGCTCAAGAGTCACTACCAAGCATGCTTTTGCTACCCTGTCGTTTGTTGCTGAGATCTTCATCTTCCTTTACGTTGGTATGGATGCTTTGGACATTGAAAAATGGAAGTTTGTTAGTGATAGTCCTGGAACATCTATAGCAACAAGTTCAGTATTGTTGGGTTTAGTACTCCTTGGAAGAGCAGCGTTTGTTTTCCCGTTATCCTATTTATCCAACTTGACTAAAAAATCACAGTATCAGAAGATCTCCTTCAGACAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTCGCTTACAATCAGTTCACGATGTCGGGGCATACTCAGCTGCGCAGCAATGCAATCATGATCACCAGCACGATCACGGTCGTCCTTTTCAGCACAGTGGTGTTTGGTCTGTTGACGAAGCCACTCATAAGACTTCTACTACCTCATTCTAAAGTCACAACCAGCATGACAACCACAGAAACATCTACTCCAAAATCATTCATTGTCCCACTTCTAGGAAACTCCCGAGATTCCGAAGCTGATCTTGAAGGCCATGAAATTCACCGTCCAAACAGCCTCCGCGCCTTACTAGCCACTCCAACTCACACAGTTCATCGACTATGGCGAAAGTTTGATGATTCGTTCATGCGTCCCGTTTTCGGTGGCAGGGGTTTTGTTCCCGTAGAACCTGGCTCACCTAGCGAACGCAACGGTAACAGTCATTGGTAA 1626 0.4323 MAIELALIASKLQNLSTSDHASIVSMNLFVALLCACIVLGHLLEENRWMNESITALLIGICTGVFILLLSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTITSFGAIGTLISCCVITLGATQAFKRMDIGPLEVGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQLNPSIALHFLGNFFYLFIASTLLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSIATSSVLLGLVLLGRAAFVFPLSYLSNLTKKSQYQKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHSKVTTSMTTTETSTPKSFIVPLLGNSRDSEADLEGHEIHRPNSLRALLATPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPSERNGNSHW* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3391 541 Gene3D - 146 197 - -
Psa6g3391 541 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 540 - -
Psa6g3391 541 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa6g3391 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3391 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3391 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3391 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa6g3391 541 PANTHER SODIUM/HYDROGEN EXCHANGER 7 540 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3391 Psa-Chr6 290681465 290685827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3391 6 539 Antiporters AT3G05030 77.881 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3391 - - gmx:732573 904.82