Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa6g3388 | ATGTTGCTTCTAATGGAGAGACTCAGACTCAGCTGCTGCCTTCAAACACTGAAACTCAGGGTTTCAAACTCTGATTCAGTTGAAGGGTTATACCCGGTTTCAAAAGTTTACACTGATGTGGCTGTTGTTCCTGAGGCAAACAAAACACGAGATTCAACACTTGATATCAATTTACAAGAGAGAGGGTTGAGGAAACTGAGGCTGAAGCAGAGAATAGTGGATGGAAAAAGGAGACAAGCATTGAAAAGTGTTTTTGTTGAAGTGGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGCGCTTTCTCGCTTATGGATGGGTTACAAATGAGCCAGTTAAGGGGAGTATTCCCGACTATTGAAGAACTCTTTCGCAGATCTCAACATCCAAACCAGATCCAAAGTGCGATGGTGGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCCGATAGTGCTAAAGCAAGATATGTGGTACAACAAAAGGAAAAACGATTCAGATCAACCTCGTGGACAAATGTAAACCACGGCATCAAGCAGGTCGCACTGACGTGGGGATTCTTCCGAAGCCAAAAGCGAAACAAAGGACTAACACTTGACGAAGGTCGGGCTATTAATCTTTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACCCAGCTACTGAGAGATTCTCTCGGTGATGGCTCCAAGGTCTTGATGCTCGTGCACATTAGCCCTTCCGAAGAAGATGTTTGCGAGACGATTTGTTCTTTAAACTTTGCAAAGAGAGCAAGAGCAATAGAGTCCAATAAAGAAGCACCTATGGAATTGAAAAAGCAAATGGAGAAGAAGATTATGGAGCTCGAGGAAGACATTATGGAAGCCGAAAAAGAGCGTCAGAGTTTAAGGGATCAAATACAGAAAGTTGAGTTAAAGTTAAGCGAGAATAAAAAGCTCGTTCCAACCACATGTAGTCTTAAGGAAAGTGATGACTTGGAAACTTCTACTAACCTCAAAGATGATTTCAAAGAGGTCACTGAAACACCTAAAGCATCTAAGAAGTCTATTCAAAGACTCTCCAATTCAGTACCTCGATTCATGAACTCAACTGTTGCTAGTCGGCATAGGCAAATTGCAGCTGAACAAGAAATCGGTAGCAGAACAAAAAGTTTAAGATCAATAGTCACCAGAAGTTCAATCCAGTTCCCATGTTCACAATCATTAAGTTATTCAGATCTTCGCATCAAAACAATACTGCGAAGTTCAACGGGAAAGTCTCGACATATTGGAACAAATAATGTTCCAAATACTATCATTCATTCAGAAAGGCCTAAGTGCAATGAATTGGAATCAAAAGTTATTAGTCCTCGAAGTACAATGGTTACATCATCAGATTCAAATTTGAGAGTAACATTGTATCGTCATAGAAGAAGGATGTCAAATCTGATCTAA | 1482 | 0.4089 | MLLLMERLRLSCCLQTLKLRVSNSDSVEGLYPVSKVYTDVAVVPEANKTRDSTLDINLQERGLRKLRLKQRIVDGKRRQALKSVFVEVEPILRSAMDGHNVCAFSLMDGLQMSQLRGVFPTIEELFRRSQHPNQIQSAMVEIEGLSEVQISDSAKARYVVQQKEKRFRSTSWTNVNHGIKQVALTWGFFRSQKRNKGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEAPMELKKQMEKKIMELEEDIMEAEKERQSLRDQIQKVELKLSENKKLVPTTCSLKESDDLETSTNLKDDFKEVTETPKASKKSIQRLSNSVPRFMNSTVASRHRQIAAEQEIGSRTKSLRSIVTRSSIQFPCSQSLSYSDLRIKTILRSSTGKSRHIGTNNVPNTIIHSERPKCNELESKVISPRSTMVTSSDSNLRVTLYRHRRRMSNLI* | 494 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa6g3388 | 493 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 317 | IPR027417 | - | |
Psa6g3388 | 493 | SMART | kinesin_4 | 5 | 285 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa6g3388 | 493 | Pfam | Kinesin motor domain | 193 | 277 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa6g3388 | 493 | PANTHER | KINESIN-LIKE PROTEIN KIN-14U | 137 | 493 | - | - | |
Psa6g3388 | 493 | PANTHER | KINESIN-LIKE PROTEIN KIN-14U | 82 | 129 | - | - | |
Psa6g3388 | 493 | MobiDBLite | consensus disorder prediction | 362 | 380 | - | - | |
Psa6g3388 | 493 | Gene3D | Kinesin motor domain | 187 | 321 | IPR036961 | - | |
Psa6g3388 | 493 | ProSiteProfiles | Kinesin motor domain profile. | 197 | 277 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa6g3388 | 493 | MobiDBLite | consensus disorder prediction | 355 | 380 | - | - | |
Psa6g3388 | 493 | Coils | Coil | 288 | 329 | - | - | |
Psa6g3388 | 493 | PANTHER | KINESIN-RELATED | 82 | 129 | IPR027640 | GO:0003777|GO:0007018 | |
Psa6g3388 | 493 | PANTHER | KINESIN-RELATED | 137 | 493 | IPR027640 | GO:0003777|GO:0007018 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa6g3388 | Psa-Chr6 | 290504817 | 290508429 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa6g3388 | 138 | 277 | Calmodulin-binding Proteins | AT5G65930 | 36.145 | 2.29e-18 | 87.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa6g3388 | - | - | gmx:100778856 | 487.263 |