Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3388 ATGTTGCTTCTAATGGAGAGACTCAGACTCAGCTGCTGCCTTCAAACACTGAAACTCAGGGTTTCAAACTCTGATTCAGTTGAAGGGTTATACCCGGTTTCAAAAGTTTACACTGATGTGGCTGTTGTTCCTGAGGCAAACAAAACACGAGATTCAACACTTGATATCAATTTACAAGAGAGAGGGTTGAGGAAACTGAGGCTGAAGCAGAGAATAGTGGATGGAAAAAGGAGACAAGCATTGAAAAGTGTTTTTGTTGAAGTGGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGCGCTTTCTCGCTTATGGATGGGTTACAAATGAGCCAGTTAAGGGGAGTATTCCCGACTATTGAAGAACTCTTTCGCAGATCTCAACATCCAAACCAGATCCAAAGTGCGATGGTGGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCCGATAGTGCTAAAGCAAGATATGTGGTACAACAAAAGGAAAAACGATTCAGATCAACCTCGTGGACAAATGTAAACCACGGCATCAAGCAGGTCGCACTGACGTGGGGATTCTTCCGAAGCCAAAAGCGAAACAAAGGACTAACACTTGACGAAGGTCGGGCTATTAATCTTTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACCCAGCTACTGAGAGATTCTCTCGGTGATGGCTCCAAGGTCTTGATGCTCGTGCACATTAGCCCTTCCGAAGAAGATGTTTGCGAGACGATTTGTTCTTTAAACTTTGCAAAGAGAGCAAGAGCAATAGAGTCCAATAAAGAAGCACCTATGGAATTGAAAAAGCAAATGGAGAAGAAGATTATGGAGCTCGAGGAAGACATTATGGAAGCCGAAAAAGAGCGTCAGAGTTTAAGGGATCAAATACAGAAAGTTGAGTTAAAGTTAAGCGAGAATAAAAAGCTCGTTCCAACCACATGTAGTCTTAAGGAAAGTGATGACTTGGAAACTTCTACTAACCTCAAAGATGATTTCAAAGAGGTCACTGAAACACCTAAAGCATCTAAGAAGTCTATTCAAAGACTCTCCAATTCAGTACCTCGATTCATGAACTCAACTGTTGCTAGTCGGCATAGGCAAATTGCAGCTGAACAAGAAATCGGTAGCAGAACAAAAAGTTTAAGATCAATAGTCACCAGAAGTTCAATCCAGTTCCCATGTTCACAATCATTAAGTTATTCAGATCTTCGCATCAAAACAATACTGCGAAGTTCAACGGGAAAGTCTCGACATATTGGAACAAATAATGTTCCAAATACTATCATTCATTCAGAAAGGCCTAAGTGCAATGAATTGGAATCAAAAGTTATTAGTCCTCGAAGTACAATGGTTACATCATCAGATTCAAATTTGAGAGTAACATTGTATCGTCATAGAAGAAGGATGTCAAATCTGATCTAA 1482 0.4089 MLLLMERLRLSCCLQTLKLRVSNSDSVEGLYPVSKVYTDVAVVPEANKTRDSTLDINLQERGLRKLRLKQRIVDGKRRQALKSVFVEVEPILRSAMDGHNVCAFSLMDGLQMSQLRGVFPTIEELFRRSQHPNQIQSAMVEIEGLSEVQISDSAKARYVVQQKEKRFRSTSWTNVNHGIKQVALTWGFFRSQKRNKGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEAPMELKKQMEKKIMELEEDIMEAEKERQSLRDQIQKVELKLSENKKLVPTTCSLKESDDLETSTNLKDDFKEVTETPKASKKSIQRLSNSVPRFMNSTVASRHRQIAAEQEIGSRTKSLRSIVTRSSIQFPCSQSLSYSDLRIKTILRSSTGKSRHIGTNNVPNTIIHSERPKCNELESKVISPRSTMVTSSDSNLRVTLYRHRRRMSNLI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3388 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 317 IPR027417 -
Psa6g3388 493 SMART kinesin_4 5 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3388 493 Pfam Kinesin motor domain 193 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3388 493 PANTHER KINESIN-LIKE PROTEIN KIN-14U 137 493 - -
Psa6g3388 493 PANTHER KINESIN-LIKE PROTEIN KIN-14U 82 129 - -
Psa6g3388 493 MobiDBLite consensus disorder prediction 362 380 - -
Psa6g3388 493 Gene3D Kinesin motor domain 187 321 IPR036961 -
Psa6g3388 493 ProSiteProfiles Kinesin motor domain profile. 197 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3388 493 MobiDBLite consensus disorder prediction 355 380 - -
Psa6g3388 493 Coils Coil 288 329 - -
Psa6g3388 493 PANTHER KINESIN-RELATED 82 129 IPR027640 GO:0003777|GO:0007018
Psa6g3388 493 PANTHER KINESIN-RELATED 137 493 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3388 Psa-Chr6 290504817 290508429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3388 138 277 Calmodulin-binding Proteins AT5G65930 36.145 2.29e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3388 - - gmx:100778856 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3388 6 290504817 290508429 Psa6g3388 6 290504817 290508429 ECH