Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3387 ATGAGTGAAAGAGGGAAGAAAGAAAGACCAACAGAGAAAAAAGAGAGGATGAAGAACATCTTCAAGAAGCTTCATATAGGTAGCAGCCACGATCCTCATCGATCCAATGAAATTCCGCCACCTGTACCATCCACGTCTGATGCTGCCGAGCATGTTCAGACTTCCGGCGCTTCTACCGCCACTACTTCTTCCTCGTCGCCGTCTACAGTGCCTATTCCTCCTGCTTCCGCCGGTGGTGGTTTGTCTGCGTTAGTCAATCGGCAGGACTTTTTCTCATCGGAGGAGGAATTTCAGGTTCAGTTAGCCCTAGCTATCAGTGCTTCCAATTCCGAGTTTCGTGGTGATGATCCGGAGAAGGATCAGATCCATGCGGCAACGCTACTCAGTTTGGGAGGACATCGGATTGATTCGAATAAGGATGATGTGGCGGAGGCGCTTTCGAGGCAGTACTGGGAATACAATGTGCTTGACTATGAAGAGAAAGTAGTGGATGGTTTTTATGATGTATATGGCCTATATAATGACCCGGCAATGCAAGGAAAGATGCCATCTCTAGCTGATCTTGAAACAAACTCAGGTGGTTCTAGCTTTGAAGTGGTCATAGTTAATCGAACAATTGATCCTGCCCTGGACGAGCTGGTGCAAATTGCACATTGTATAGCATTGGACTGTCCTGTCACTGAGATCGGTATTTTGGTGCAAAGGCTTGCCGAACTTGTTACTAGCCATATGGGCGGCCCTGTAAAGGATGCTAATATTATATTAGCAAAATGGACAGAAAGAAGTACAGAATTAAGGACATCTCTTCACACAAGTGTATTACCTCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGCGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTTGTTAAAGGCAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAATTAGATGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCAGCTGATATTTTAAATGCGAAGGATAACGCCTTTAAGTCTTACAACCCCAAGATTGTGCCGAGTTTGCCTTCCATTGAGGAAACTGGGCTTTCTTACTCAAGACCCATACCACCCTCTAATGGTGAAGGCAGTAGTCAGATTTCTGTTATAAAAGGTCCTACGATGACTTGGAATGGACAGTCATATACTGAGAAGTCAGAGTTTATGCCTTCAAACTTTGGTTTGAACAGAGACACTGGTGTTGGTCCTTCTAAAATTCCTAATAGAGGGAGTCCTAATCAACGGGAAAATTTGCCACCTTCATATGGTAATTCTTTGTACAAAGGTACTCTTGGAATGAATACTGTGGGTGATGGGACAAGATTGAATGTCAATGTTGTGCCATACGCCCAGAACAACCCCACCGACTCTCAGAACCTTTTTGCAGATCTGAACCCATTCTTGATAAAAGGGACTGGGAAGTCCTCCGTGCACAACAAACCTGTGGAAAATAAACCTCCTGAGCACGGTACAAAAAACAATACTGTTTCTGGTCGACCCGTGTCACCACTGATGTGGAAGAATCAGCATGCCTACAACGAAGTCCCCAGAAAAACTAATCATAACCCTAATGAATATAACCCTCCTTTATTTGTTTCCAATATCTCTTTCACATCTGAACATACTGATCTCAGCACTTCCAATTCATCATACAATTCAAATATAAATAATGATATTAGCTCTCGAACTTCTGCACAAATTACCGGTTCAGCCGCATCAGCTGGTGTAGGTGAGCTGAACCGGATCGAAGGTCACAATGCTGATTTTAGAAGGGGTGATTTGGAAAGTTCTCAGAATGTCATGGTAAAGAGATTTAATGAACCCGAAAGCACTGAACTTGGATATCGTGACAGGCGGAAGTGCATATATGACAGATTCATGGGAAGCAATTTGCAATTAAAAGATTCAGATAGTCCTAGCTCTTCAATTGATTCCATTACAAACAGGGTCGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATACCGAGCGGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCCTTATCTGAATTTAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCCGTCACCCGGCCTCCCAATCTCTCAATCATTTCAGAGTTTCTCCCGAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATCGATGAGAAACAAAGAATAAAAATGGCTCTTGATGTGGCTAGGGGTATGAATTGCTTGCACGCCAGCACACCTACGATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTGGTTGATAAGAACTGGAACGTTAAGGTATGCGATTTTGGGCTGTCAAGGTTGAAGCATAACACATTTTTATCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCTTCAAATGAGAAGTGTGATGTTTATAGTTTTGGTGTCATCCTATGGGAGCTTGCCACCCTGAAGTTGCCATGGACTGGAATGAATCCCATGCAAGTTGTTGGTGCGGTAGGTTTCCAAAATCGCCGCCTTGAAATTCCTAAGGAAGTTGATCCTTTAGTAGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCATTTGCGCAGCTGACGGTGGCTCTTAAGCCCTTGCAGCGTCTGGCTCTCCCATCTCATCAAGACCAGGTGGCTTCACCTCTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2919 0.4406 MSERGKKERPTEKKERMKNIFKKLHIGSSHDPHRSNEIPPPVPSTSDAAEHVQTSGASTATTSSSSPSTVPIPPASAGGGLSALVNRQDFFSSEEEFQVQLALAISASNSEFRGDDPEKDQIHAATLLSLGGHRIDSNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLYNDPAMQGKMPSLADLETNSGGSSFEVVIVNRTIDPALDELVQIAHCIALDCPVTEIGILVQRLAELVTSHMGGPVKDANIILAKWTERSTELRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADILNAKDNAFKSYNPKIVPSLPSIEETGLSYSRPIPPSNGEGSSQISVIKGPTMTWNGQSYTEKSEFMPSNFGLNRDTGVGPSKIPNRGSPNQRENLPPSYGNSLYKGTLGMNTVGDGTRLNVNVVPYAQNNPTDSQNLFADLNPFLIKGTGKSSVHNKPVENKPPEHGTKNNTVSGRPVSPLMWKNQHAYNEVPRKTNHNPNEYNPPLFVSNISFTSEHTDLSTSNSSYNSNINNDISSRTSAQITGSAASAGVGELNRIEGHNADFRRGDLESSQNVMVKRFNEPESTELGYRDRRKCIYDRFMGSNLQLKDSDSPSSSIDSITNRVDQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKQRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIWECWQQDPNLRPSFAQLTVALKPLQRLALPSHQDQVASPLPQEISVNSTP* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3387 972 CDD STKc_MAP3K-like 697 940 - -
Psa6g3387 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Psa6g3387 972 Gene3D Transferase(Phosphotransferase) domain 1 770 953 - -
Psa6g3387 972 MobiDBLite consensus disorder prediction 1 32 - -
Psa6g3387 972 MobiDBLite consensus disorder prediction 47 70 - -
Psa6g3387 972 MobiDBLite consensus disorder prediction 1 70 - -
Psa6g3387 972 SMART serkin_6 691 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3387 972 Pfam Ethylene-responsive protein kinase Le-CTR1 143 341 - -
Psa6g3387 972 PANTHER SERINE-THREONINE PROTEIN KINASE 81 964 - -
Psa6g3387 972 ProSitePatterns Protein kinases ATP-binding region signature. 697 719 IPR017441 GO:0005524
Psa6g3387 972 PRINTS Tyrosine kinase catalytic domain signature 765 778 IPR001245 GO:0004672|GO:0006468
Psa6g3387 972 PRINTS Tyrosine kinase catalytic domain signature 804 822 IPR001245 GO:0004672|GO:0006468
Psa6g3387 972 PRINTS Tyrosine kinase catalytic domain signature 851 861 IPR001245 GO:0004672|GO:0006468
Psa6g3387 972 PRINTS Tyrosine kinase catalytic domain signature 870 892 IPR001245 GO:0004672|GO:0006468
Psa6g3387 972 PRINTS Tyrosine kinase catalytic domain signature 914 936 IPR001245 GO:0004672|GO:0006468
Psa6g3387 972 ProSiteProfiles Protein kinase domain profile. 691 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3387 972 MobiDBLite consensus disorder prediction 495 521 - -
Psa6g3387 972 Gene3D Phosphorylase Kinase; domain 1 684 768 - -
Psa6g3387 972 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 81 964 - -
Psa6g3387 972 SUPERFAMILY Protein kinase-like (PK-like) 682 961 IPR011009 -
Psa6g3387 972 Pfam Protein tyrosine and serine/threonine kinase 692 941 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3387 Psa-Chr6 290327827 290337812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3387 17 927 MAP Kinase Kinase Kinase AT1G08720 54.973 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Psa6g3387 PK_Tyr_Ser-Thr 1.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3387 - - aprc:113870732 1590.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3387 6 290327827 290337812 Psa6g3387 6 290327827 290337812 ECH