Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3371 ATGTTCTCACCATTGGTTTCTTGGATTTTGTCAACCTCATCTTCTTCCTCCTCATCATCATCTGAAGAAGAAGACGACGACGAACATGAAAATCTCGACATTAGCAATGACGAATCAGACTACGAAAACTTTCACAACGACAATGTTGAAGACCAAATGGACGATGTGGATGATCACACCATTCCCATTGGACTTGCCATTTCTGATGCCTCCCCCGATGTGACCGTGGCCTTGCCGGCCCCTACAGATTACACAAACACTGCCACCACTACTAAAGAAACACGCTCGAAACGACAACACAACAAGTATTCTGGTGGGGTGAGACAATATCAGAGGATATGGACAAAGCAAGATGAGATAGAACTGTTGAAAGGATATCTGGATTACATCAAGCAACAAGGAAGAACAAGCACCACTCTTCAAAACCATGTAGCTTCGTTCTATGATCAAGTTATGCCAAAATTCAGTACGGATTTCAATAGGAACCAGATTGTTGAGAAGCTACGTAGGTTAAAAAGAAAACACAAGATGGTTTTGGATAAAGGCAAAGAGGTTCAGGTTTCTTTCAAAAGCTCCCATGAACAAGCCATTTTCGAAATTTCCCGCAAGATTTGGGGCAATGACACAGACCATGATGTTTTGGAAGTTGATGAATCAAGACCAGTTCCTGACAGTCCTGATCTAATTGACGACATTAAGATGAAGGGTGAACATGTTGACAATTGCGAAGAAACGGAGAAAAGGGCGCACAAGCGCGCAAGGCTTGCATCAGACAATGGTGATGCTACTAGTAGTATACATGGATTCATTGAGGAAACCATGAGGTCATGTTTCTCACCATTGCTGAAGGAACTATTGGATGATGCTCCGGTAGAGCCACTCGACGTGTTGCCAATGTTGTTATCCACCGAGGAAGCGAGGGATGAGCAATGGTTAAAACAAAGGATTTTGGAGCTAGAAGTGTATTTGAATCGGTTGGAGTTGTTGCAGGGTCAGATCAAATCTAGGTTGGAGGATTTGAGGTCTAGCTTAGGTTGA 1038 0.4316 MFSPLVSWILSTSSSSSSSSSEEEDDDEHENLDISNDESDYENFHNDNVEDQMDDVDDHTIPIGLAISDASPDVTVALPAPTDYTNTATTTKETRSKRQHNKYSGGVRQYQRIWTKQDEIELLKGYLDYIKQQGRTSTTLQNHVASFYDQVMPKFSTDFNRNQIVEKLRRLKRKHKMVLDKGKEVQVSFKSSHEQAIFEISRKIWGNDTDHDVLEVDESRPVPDSPDLIDDIKMKGEHVDNCEETEKRAHKRARLASDNGDATSSIHGFIEETMRSCFSPLLKELLDDAPVEPLDVLPMLLSTEEARDEQWLKQRILELEVYLNRLELLQGQIKSRLEDLRSSLG* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3371 345 MobiDBLite consensus disorder prediction 1 40 - -
Psa6g3371 345 MobiDBLite consensus disorder prediction 20 35 - -
Psa6g3371 345 MobiDBLite consensus disorder prediction 1 19 - -
Psa6g3371 345 PANTHER BNAANNG10740D PROTEIN-RELATED 1 343 IPR007592 GO:0006355
Psa6g3371 345 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 343 - -
Psa6g3371 345 Pfam Protein of unknown function, DUF573 111 206 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3371 Psa-Chr6 289875190 289876227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3371 66 342 GeBP Transcription Factor Family AT5G28040 31.921 7.58e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Psa6g3371 DUF573 5.2e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3371 - - gmx:102662842 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0197 3 22217571 22219812 Psa6g3371 6 289875190 289876227 PCT