Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3363 ATGGAGAATTGGTTCCCAGATTTCACCTGGGAACACGTATCAAGGAAGCTAGCTGAGGTTGGATTTAAACGTAGTGCAGAGAAATGCAAAGAGAAATTTGAAGAAGAAAGTAGATTTTTCAACAATATTAATAATAATCAGAATAATTACGGTAAGAATTTTCGGTTTGTTACTGAACTTGAAGAGGTTTATCAAGGTGGTGGTGGTGGTGGTGAGAGTAAACGGAGCGAGGTGCAAGATAAGATGAGGAGTGGATCGAATGATGATGACGATGATTCGAGAAATGATGATGTTTTGGTGAAGAAGAAAGATGAAGATGAGGTGTTTGAGAAAAGTACTAGGAATGATGAGAGGAAGAGGAAAAGAGGTGGTGATAGATTTGAAGTGTTTAAGGGTTTTTGCGAGAGTGTTGTGAAGAAAATGATGGATCAACAAGAAGAGATGCATAACAAGCTTATTGAAGATATGATTAAAAGAGATGAAGAGAAGTTTAGTAGAGAAGAAGCTTGGAAGAAACAAGAGATGGAGAAAATGAACAAAGAGCTTGAGTTGATGGCACAAGAACAAGCTATTGCTGGTGATAGACAAGCCAATATAATTCAGTTCTTGAACAAATTCTCATCAACAACAAATTCCTCTTCAATTTTAGCTTCAATTCAAAGCTTTGGAATCGGAAAAGAAGACAAATCCAAGGATAATGCTAATAGGAAAAGGTCACTTGATTCAAGAACTTGTCCTTATTTTCATCTATTGAGCAATCTTTATAATCAAGGTAAACTTGTTCTACAATCTGAAAAGAATGAAACCAATAACAACAACATGAATCTGCCAGAAGAAAATGTTGTTCAAGAGAAACAAGCTCCACAAGATGAAAACAATGGTGGTGGTGAGTCTTCTGATCAAGTGGGGCCTGCATGCTGGTAG 924 0.368 MENWFPDFTWEHVSRKLAEVGFKRSAEKCKEKFEEESRFFNNINNNQNNYGKNFRFVTELEEVYQGGGGGGESKRSEVQDKMRSGSNDDDDDSRNDDVLVKKKDEDEVFEKSTRNDERKRKRGGDRFEVFKGFCESVVKKMMDQQEEMHNKLIEDMIKRDEEKFSREEAWKKQEMEKMNKELELMAQEQAIAGDRQANIIQFLNKFSSTTNSSSILASIQSFGIGKEDKSKDNANRKRSLDSRTCPYFHLLSNLYNQGKLVLQSEKNETNNNNMNLPEENVVQEKQAPQDENNGGGESSDQVGPACW* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3363 307 MobiDBLite consensus disorder prediction 65 121 - -
Psa6g3363 307 MobiDBLite consensus disorder prediction 74 121 - -
Psa6g3363 307 Coils Coil 172 192 - -
Psa6g3363 307 MobiDBLite consensus disorder prediction 281 307 - -
Psa6g3363 307 Pfam Myb/SANT-like DNA-binding domain 9 62 IPR044822 -
Psa6g3363 307 PANTHER - 1 213 - -
Psa6g3363 307 PANTHER - 229 296 - -
Psa6g3363 307 MobiDBLite consensus disorder prediction 281 299 - -
Psa6g3363 307 Gene3D - 6 41 - -
Psa6g3363 307 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 1 213 - -
Psa6g3363 307 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 229 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3363 Psa-Chr6 289074490 289076793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3363 229 282 Trihelix Transcription Factor Family AT5G28300 47.368 2.72e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa6g3363 Myb_DNA-bind_4 3.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3363 - - ccaj:109795059 221.861