Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3362 ATGGCTGATTCTTCAACCAACCCAAAGGATCATCAAAATTCACGTCTCTACCATCCCTACCAGCACCTCAACATTCCCGTCGACAAGCTCTACAACCTCCCCACCTCGCCGGAGCATCTTTTCCCTGAAGAAGCTTCCAGAAAGCACCGTTCATGGGGCGACAACCTCCAGTATTACACCGGCACCGGCTACCTCTCCGGCTCCATCATCGGAGGCACAAGAGGATCCATCGAAGGTCTTAAGGCTGCTGAGTCAGGTGACTCTCTTAAGATCCGAGTCAACCGTGTTCTTAACTCGGGTGGTCAAGGAGGTCGTCGACTCGGTAACTCGCTTGGGGTTCTGGGATTGATCTTTGCAGGATTGGAGAGTGCTATGATCCATGTTAGGGACACGGATGACTTGGTTAACAGCGCGGTTGCTGGACTCGGTACCGGGGCGCTTTATAAGGCTGCTGCGGGTCCCCGATCTGCTGCTATTGCTGGTGCTCTTGGTGGAATTGCGGCGGCTGTGGGAGTTGCCGGAAAGCAAGCTTTGAAACGACACATTCCAATTTAA 555 0.5333 MADSSTNPKDHQNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWGDNLQYYTGTGYLSGSIIGGTRGSIEGLKAAESGDSLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGALYKAAAGPRSAAIAGALGGIAAAVGVAGKQALKRHIPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3362 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 184 - -
Psa6g3362 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
Psa6g3362 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3362 Psa-Chr6 289046969 289047523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3362 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 55.000 2.52e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3362 K17794 - gmx:100803835 275.404