Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3334 ATGAAAGAACTCTTGTCTTGGCTTAAAATCCTCTCTTTTTCTTTCATCTTTCTTCTTTTAGTTCTCAAACTAACAGTGTTACTCTGGTGGAGACCAAGAAAAATTGAAGGCTATTTTTCTAAACAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAACGTTAAGGAACTCGTTGCTATGATGATTCAAGCTTCCTCTCAACCCATGCCTAATTTCTCTCACAACATTCTCCCCAGAGTCCTTTCTTTCTACCATCACTGGAAGAAAATTTACGGTGGAACGTTCCTAGTTTGGTTCGGACCCACTGTTCGACTTACAGTGTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAATTTTATGAAAAAAATGAAGCTCCACCACTTGTGAAGCAGCTTGAAGGTGATGGACTTCTTAGCCTTAAAGGAGAAAAATGGGCTCACCACCGTAGAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAATTGGTCGGAAATGAGTCATAAAGGTGAGGTGGAAATAGAAGTCTCTGAATGCTTTCAAACCCTAACAGAAGATGTTATTACTAAGACAGCCTTTGGAAGTAGCTATCAAGATGGAAAAGCTATTTTCCGCTTACAAGCTCAACAAATGGTCTTGGCTGCTGATGCCTTCCAAAAAGTTTTCATTCCCGGTTACAGATTCTTTCCAACAAGGAGGAATATAAAATCTTGGAAACTAGACAAGCAAATAAAGAAATCGTTGGTGAAGTTAATAGAAAGAAGGAGAGAGAATTCAAATGAGAGAATTGAAAAAGGGCCAAAAGATTTACTTGGATTAATGATTCAAGCCTCTAACAAAACAAATGTGACAGTGGATGATATCGTGGGAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACTTGCTGACGTGGACGACCATACTCTTAGCAATGCACCCACAATGGCAGGTACAGGCACGTGACGAGGTCCTTAAGATGTGTGGGTCACGTGACGTTCCAACTAAAGATCATGTTGTAAAGCTCAAGACGCTGAACATGATAGTTAACGAGTCTCTACGGCTATACCCACCTACCATCGCAACAATCCGACGGGCGAAAACTGATGTTGAATTAGGAGGCTACAAGATCCCGCGCGGGACAGAGCTTTTAATTCCAATCCTAGCCGTTCATCACGATCAAGCAATATGGGGCAACGATGTAAACGAATTCAATCCTGGCCGTTTCTCTGAAGGTGTAGCCCGCGCCGCGAAACATCCGGTGGCGTTCATACCTTTTGGCCTCGGTGTGCGCACATGTATAGGACAAAACCTCGCAGTGCTACAAACAAAATTGGCACTAGTAATGATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTTCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAAACAATTGTCCACACTGGATAATAACCCTCAAGGGTCCTCTTCATAA 1572 0.4249 MKELLSWLKILSFSFIFLLLVLKLTVLLWWRPRKIEGYFSKQGIRGPPYRFFIGNVKELVAMMIQASSQPMPNFSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLENWSEMSHKGEVEIEVSECFQTLTEDVITKTAFGSSYQDGKAIFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNIKSWKLDKQIKKSLVKLIERRRENSNERIEKGPKDLLGLMIQASNKTNVTVDDIVGECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVQARDEVLKMCGSRDVPTKDHVVKLKTLNMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDQAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALVMILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFKQLSTLDNNPQGSSS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3334 523 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Psa6g3334 523 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PANTHER CYTOCHROMEA2 5 506 - -
Psa6g3334 523 Pfam Cytochrome P450 83 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3334 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3334 Psa-Chr6 286323915 286328893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3334 2 516 Cytochrome P450 AT2G26710 76.673 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3334 K15639 - gmx:100780027 884.404