Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3282 ATGTGCGAAACCCTAAAAACCAACTACCAACTCAGCGACGAGATCGGACGTGGGCGTTTCGGCACCATTTACCGGTGCTTCCACCCTAGCTCCGCCGTACCTCAAGCCTGCAAAGTCATCGACAAATCTCTCCTCTCCGATTCCACCGATCGTGAGTGTCTTCAAAACGAACCGAAATTCCTCTCTCTCCTTTCACCTCACCCTAACATCCTTCAAATCTACGACGTTTTCGAAAACGACGATTTCTTATCCATCGTTTTAGAGCTTTGTCAGCCTCTCACTCTCCTCGATCGCATCGTTTCGAATCCTTTCACCGAACAACAGGCGGCGTCTCTCATCAAAAAGCTTCTCGAAGCCGTTGTTCACTGCCACCGTCTCGGTGTAGCGCACCGTGACATCAAGCCGGATAACATTCTCTTTGATTCTAACGATAATCTAAAATTAGCTGATTTTGGTTCGGCGGAATGGTTCGGCGACGGCAGAACCATGAGCGGTGTTGTTGGAACGCCGTATTACGTGGCGCCGGAGGTTCTTTTAGGAAGAGATTACACAGAGAAAGTTGATGTGTGGAGTGTTGGTGTGTTACTGTACATAATGTTGAGCGGGATTCCTCCTTTTTACGGAGATTCCGCGACTGAAATTTTTGAAGCTGTTATTAGAGCGAATCTGAGGTTTCCGTCTAGAATCTTCCGTTCCGTTTCATCCTCTGCCAAGGATCTGTTGAGAAAAATGATTTGTAGAGATGCTTCCAAAAGATTTTCTGCAGAACAAGCCTTGAGACACCCTTGGATAGTGAGTGGAGGAGAAACAACTAATCAGGATTGA 825 0.4703 MCETLKTNYQLSDEIGRGRFGTIYRCFHPSSAVPQACKVIDKSLLSDSTDRECLQNEPKFLSLLSPHPNILQIYDVFENDDFLSIVLELCQPLTLLDRIVSNPFTEQQAASLIKKLLEAVVHCHRLGVAHRDIKPDNILFDSNDNLKLADFGSAEWFGDGRTMSGVVGTPYYVAPEVLLGRDYTEKVDVWSVGVLLYIMLSGIPPFYGDSATEIFEAVIRANLRFPSRIFRSVSSSAKDLLRKMICRDASKRFSAEQALRHPWIVSGGETTNQD* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3282 274 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 272 - -
Psa6g3282 274 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3282 274 Gene3D Transferase(Phosphotransferase) domain 1 94 274 - -
Psa6g3282 274 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3282 274 CDD STKc_CAMK 8 263 - -
Psa6g3282 274 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3282 274 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Psa6g3282 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Psa6g3282 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 272 - -
Psa6g3282 274 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3282 Psa-Chr6 283430481 283432749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3282 3 273 EF-hand Containing Proteins AT1G50700 40.364 8.20e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa6g3282 Pkinase 9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3282 - K08794 gmx:548089 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3282 6 283430481 283432749 Psa6g3282 6 283430481 283432749 ECH