Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3273 ATGGCGAACCGGTGGTGGACTGGACCGGTGGGTTTAGGCGGGATGGATAACTCGGTCAACTCATCACCACTAGTACCAAAACCGGATCTGGGGTTTTCCATGAACGAAAGTGCGGTGACAGGAGTGAATAACAATAACAATAACAATGAAGAGGATGAGAGAGAGAACAGCGATGAACAAAAAGGAGGAGCTATAGAAACACACAACTCCACGCGCCGTCCACGAGGTCGTCCGTCAGGGTCGAAAAACAAACCGAAGCCACCGATATTTATAACAAGAGACAGCCCTAACGCGCTTAGAAGCCATGTGATGGAAGTAGCGTCAGGGACTGATATAGCTGATAGTGTTGTTCAGTTCGCTAGGAAACGACAGAGAGGTATTTGCATTCTGAGCGCAAGTGGAACCGTTGTTAATGTTTCTCTCCGGCAGCCTACAGGTCCTGGAGCTGTGGTGGCGCTTCCGGGGAGATTTGATATTCTGTCGTTGACTGGTTCGGTGCTTCCTGGACCTTCGCCGCCTGGTGCTACTGGTTTGACTATTTATCTTTCTGGAGGGCAGGGACAGGTGGTTGGTGGTGGAGTGGTTGGGCCGCTTGTGGCGGCGGGGCCGGTTATGTTGATGGCTGCGACTTTTTCGAATGCGACGTATGAGAGGTTGCCTGTGGAAGATGGTGATGATCAGGAAGGGCAGCAGGGTGGTGGTGGTGGTGGTGGAGGTGGTGGTGATGAGTCTCCTCCGGCTGGGATGGGACAGTTGGCGGGTGGATCGGTCGGAGAAGGTTCGTCGTCGATTCCGGTTTATAATAATGTTGGTGGTGGTTTAGGTGTTTCAAATGGACAACAGTTGATGAATAATCATGAAGCTTATAATTCTCCTTGGGGTCATGGTGGTAGACCACCTTACTAA 906 0.5132 MANRWWTGPVGLGGMDNSVNSSPLVPKPDLGFSMNESAVTGVNNNNNNNEEDERENSDEQKGGAIETHNSTRRPRGRPSGSKNKPKPPIFITRDSPNALRSHVMEVASGTDIADSVVQFARKRQRGICILSASGTVVNVSLRQPTGPGAVVALPGRFDILSLTGSVLPGPSPPGATGLTIYLSGGQGQVVGGGVVGPLVAAGPVMLMAATFSNATYERLPVEDGDDQEGQQGGGGGGGGGGDESPPAGMGQLAGGSVGEGSSSIPVYNNVGGGLGVSNGQQLMNNHEAYNSPWGHGGRPPY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3273 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Psa6g3273 301 MobiDBLite consensus disorder prediction 17 95 - -
Psa6g3273 301 PIRSF ESCAROLA 18 301 IPR014476 GO:0003680
Psa6g3273 301 Gene3D - 99 227 - -
Psa6g3273 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 223 - -
Psa6g3273 301 ProSiteProfiles PPC domain profile profile. 96 231 IPR005175 -
Psa6g3273 301 MobiDBLite consensus disorder prediction 48 73 - -
Psa6g3273 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 301 IPR014476 GO:0003680
Psa6g3273 301 CDD DUF296 100 183 IPR005175 -
Psa6g3273 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3273 Psa-Chr6 283074220 283077380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3273 1 221 AT-hook Motif Nuclear Localized (AHL) Family AT3G04570 61.925 1.35e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3273 - - gmx:100795097 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3273 6 283074220 283077380 Psa6g3273 6 283074220 283077380 ECH