Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3261 ATGAAACCTTTTCTTTTCTTTCTCATCCCATTCTCTTTCTTTTTCCAAACACAGTTACCACTAGTTTCTTCTGCTACAACTCTTCCCTTTCAACTCATCACTCTCCTTTCAATAAAATCAGCCCTCATTGACCCTCTTAATCATCTCAATGACTGGAAAATCAACCCTTCTAATTCTTCCTCTGCTTTCTCAAACTCCAATAACTCCCAAGACCCAATTTGGTGTTTTTGGAGAGGCATCACTTGTCACCCAAAAACAGCACAAATCACTTCCCTAAACCTCTCTCACCTCAATCTTACAGGCACAATCTCACCTCAAATCCGCTACTTAACCAGCTTAACCCACTTGAACATAAGTGGAAATGATTTCAATGGAACTTTTCAAACAGCAATTTTCCAACTCACTGAGCTTAGAACACTAGACATTAGCCATAACTCCTTCAACTCAACTTTCCCACCTGGAATATCAAAGTTAAGATTCTTAAGAATCTTCAATGCTTTCAGCAACAACTTCACAGGCCCTCTTCCTGAAGAACTAATCAGGCTTCCATTTCTAGAACAACTTAACCTTGGTGGAAGCTATTTCAGTGGCAGAATCCCACCAAGCTATGGAAATTTCAAAAGACTCAAATTCTTATTATTTCATGGTAATGCATTGGAAGGTTCACTACCACCTGAATTAGGCTTATTATCAGAGCTACAACACTTGGAAATTGGATACAACCCATTCTCAGGAACAATACCAGTGGAATTAACAATGTTGTCTAATCTCAAATATTTAGACATCTCATTCACAAACATTTCAGGTCAAGTGATTCCTGAACTAGGAAACTTAACTATGCTTGAAAATTTGTTTCTCTTTGCGAATCGCTTAAGCGGAGAAATCCCATCAAGCATAGGCAAGTTGAAATCACTAAAAGATCTTGATTTATCGGACAATGAACTCACAGGTTCAATTCCACCAGAAATAACAATGTTGAAGGAACTAACAAGGGTGAATCTTATGATTAACAAGCTAAAAGGTGAAATTCCACAAGGAATCGGTGAGCTTCCAAAACTCAACAGGTTCTATGTTTTCAACAACTCACTCAATGGTACACTACCACCAAAACTCGGCTCCAACGGGCTACTACAATTACTAGATGTTTCAACAAACTCACTTCAAGGTTCAATCCCTATACAAATTTGCAAAGGAAGCAATCTTGTTAAGTTCAATCTCTTCGACAACAAATTCACCAATAGTCTTCCATTATCGCTAGCCAACTGCACCTCACTTGCTAGGGTTCGGATACAAAACAACAAACTCACTGGTTCAATTCCACAAACACTTACAATGCTTCCTAATTTGACATACCTTGATTTGAGCAACAACAATTTCTACGGGGAAATTCCTAAAGAATTAGGCAACCTCCAATACCTAAACATCACAGGAAACTCGTTTGAAAGCAATTTACCTAGCAATATTTGGAACGCAAGTAATCTACAGATTTTCTCAGCTTCGAATTCGAAAATCACCGGTCAAATTCCCGAATTCCTTGGATGCGAATCGATTTACAGGATTGAATTGCAAGGGAACTTAATCAACGGTAGCATTCCTTGGAATATCGGTCATTGCGAGAAACTGATTATGTTGAATCTAAGTAGAAACCATCTCACCGGGATCATACCTTGGGAAATCTCAACTCTTCCTTCAATCACCGACGTTGATCTGTCGCAAAACTCACTCACCGGAACAATACCTTCAAGCTTCAACAATTGCTCCACTCTCCAGAATTTCAACGTCAGCTTCAACTCCCTCACCGGTCCAATTCCTTCCTCCGGCATCTTCCAGAGTCTCCATCCTTCTTCCTACTCCGGTAACAAAAACCTGTGTGGCGATCTTTTAGCCAAACCCTGTGCCACTTCCGTAGAAAACGAACTTGAGGTCCAGCGCCAGGAACCAAAGAAAACCGCCGGCGCAATCATTTGGATAATCGCGGCGGCGTTCGGGATCGGACTCTTCGTTATCGTCGCCGGAACACGTTGCTTCCACGCGAATTATAACCGTGGTTTCAACGGAAACGAGAATAACGGAGAAATCGGACCGTGGAAGTTAACGGCGTTTCAGCGGTTAAACTTTACGGCGGAGGATGTACTCGAGTGCGTCTCAATGTCTGATAAGATATTAGGAATGGGGTCCACAGGAACGGTTTATAAAGCAGAAATGCCAGGTGGAGAAATCATAGCCGTTAAAAAGCTATGGGGAAAACAAAAGGAAAATAACAGTAATCTAATCAGACGGAGGAGAGGCGTTTTAGCTGAAGTTGATGTATTAGGAAACGTGAGGCACAGAAACATAGTGAGATTGTTAGGATGTTGCAGCAATCAGGAAATTACCATGTTGCTCTACGAGTACATGCCAAACGGTAACCTTGATGATTTACTACATGGAGAGAATAAAGGGGACAATATGGTAATTTCAGATTGGTTTACTAGGTATAACATAGCATTGGGTGTGGCTCAGGGAATATGTTATCTACACCATGATTGTGATCCTGTGATTGTTCATAGAGATCTTAAACCTAGTAACATTTTATTGGACGGTGAGATGGAAGCTAGAGTGGCTGATTTTGGTGTTGCTAAGTTGATTCAAGCGGATGAATCTATGTCTGTTATTGCTGGATCATATGGTTACATTGCTCCAGAGTATGCTTATACACTCCAAGTTGATGAGAAGAGTGACATTTACAGTTATGGAGTGGTGTTGATGGAAATTTTAAGTGGAAAACGTTCGGTGGATCAAGAATTTGGTGATGGGAATAGCATTGTGGATTGGGTTAAGTCAAAAATAAAGACGAAAGATGGAATTGAAGGTATATTGGACAAGAATGCAGGGCCAGGGTGTGGTTCAGTGAGGGAAGAAATGATACAAATGCTTAGAATTGCATTGCTTTGTACAAGCAGAAATCCAGCTGATAGGCCTTCAATGAGAGATGTTGTGTTGATGCTTCAAGCGGCTAAACCTAAGAGAAAATTGCTTGGTGGAGGTGGTGATGTTGCATTGGTTCAAAAGCCAATTACCAATGAAAGCTAG 3072 0.4069 MKPFLFFLIPFSFFFQTQLPLVSSATTLPFQLITLLSIKSALIDPLNHLNDWKINPSNSSSAFSNSNNSQDPIWCFWRGITCHPKTAQITSLNLSHLNLTGTISPQIRYLTSLTHLNISGNDFNGTFQTAIFQLTELRTLDISHNSFNSTFPPGISKLRFLRIFNAFSNNFTGPLPEELIRLPFLEQLNLGGSYFSGRIPPSYGNFKRLKFLLFHGNALEGSLPPELGLLSELQHLEIGYNPFSGTIPVELTMLSNLKYLDISFTNISGQVIPELGNLTMLENLFLFANRLSGEIPSSIGKLKSLKDLDLSDNELTGSIPPEITMLKELTRVNLMINKLKGEIPQGIGELPKLNRFYVFNNSLNGTLPPKLGSNGLLQLLDVSTNSLQGSIPIQICKGSNLVKFNLFDNKFTNSLPLSLANCTSLARVRIQNNKLTGSIPQTLTMLPNLTYLDLSNNNFYGEIPKELGNLQYLNITGNSFESNLPSNIWNASNLQIFSASNSKITGQIPEFLGCESIYRIELQGNLINGSIPWNIGHCEKLIMLNLSRNHLTGIIPWEISTLPSITDVDLSQNSLTGTIPSSFNNCSTLQNFNVSFNSLTGPIPSSGIFQSLHPSSYSGNKNLCGDLLAKPCATSVENELEVQRQEPKKTAGAIIWIIAAAFGIGLFVIVAGTRCFHANYNRGFNGNENNGEIGPWKLTAFQRLNFTAEDVLECVSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKQKENNSNLIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNQEITMLLYEYMPNGNLDDLLHGENKGDNMVISDWFTRYNIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQADESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDQEFGDGNSIVDWVKSKIKTKDGIEGILDKNAGPGCGSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQAAKPKRKLLGGGGDVALVQKPITNES* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3261 1023 SMART LRR_typ_2 302 326 IPR003591 -
Psa6g3261 1023 SMART LRR_typ_2 562 585 IPR003591 -
Psa6g3261 1023 SMART LRR_typ_2 446 470 IPR003591 -
Psa6g3261 1023 SMART LRR_typ_2 350 374 IPR003591 -
Psa6g3261 1023 SMART LRR_typ_2 110 129 IPR003591 -
Psa6g3261 1023 SMART LRR_typ_2 134 158 IPR003591 -
Psa6g3261 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Psa6g3261 1023 Pfam Leucine Rich repeat 110 125 IPR001611 GO:0005515
Psa6g3261 1023 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Psa6g3261 1023 SUPERFAMILY RNI-like 91 412 - -
Psa6g3261 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 1014 - -
Psa6g3261 1023 ProSiteProfiles Leucine-rich repeat profile. 304 326 IPR001611 GO:0005515
Psa6g3261 1023 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 3 1014 - -
Psa6g3261 1023 ProSiteProfiles Protein kinase domain profile. 716 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3261 1023 Gene3D Transferase(Phosphotransferase) domain 1 799 1006 - -
Psa6g3261 1023 Pfam Leucine Rich Repeat 448 470 IPR001611 GO:0005515
Psa6g3261 1023 SMART serkin_6 716 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3261 1023 Gene3D Ribonuclease Inhibitor 31 103 IPR032675 -
Psa6g3261 1023 Gene3D Ribonuclease Inhibitor 104 346 IPR032675 -
Psa6g3261 1023 Gene3D Ribonuclease Inhibitor 347 640 IPR032675 -
Psa6g3261 1023 SUPERFAMILY L domain-like 318 624 - -
Psa6g3261 1023 Gene3D Phosphorylase Kinase; domain 1 692 798 - -
Psa6g3261 1023 SUPERFAMILY Protein kinase-like (PK-like) 719 996 IPR011009 -
Psa6g3261 1023 PRINTS Leucine-rich repeat signature 305 318 - -
Psa6g3261 1023 PRINTS Leucine-rich repeat signature 446 459 - -
Psa6g3261 1023 Pfam Protein kinase domain 719 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3261 Psa-Chr6 281551380 281556628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3261 4 1004 Receptor kinase-like Gene Family AT1G08590 42.941 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa6g3261 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3261 - - gmx:100809695 1538.86