Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3251 ATGCTCGTTTTGTCTTCCTGTCTGCTACTGTCCTTAATGCCAAGGAATTTGCTGATTAGGTGGCAAAAGGTGCACCAACAGCCTTGTCATATTGTTTATACAGATTATCGGCCAACTCCCCTTCAACATTATATTTCTCCTTCCGAAAGCGAGGGTCTATACTTAGTGGTAGATGAAAAGGGAAAGTTTCGCGAAGACAGTTTTCATAAAGCTTTGAATGCTCTTGTTCCCGCTGCTGATGGTGATAGGAAAAAAAGAAAATGCGAAGTGGCAAAAAGGAGAGCTTTGGTGCTGCAGAGCTATCTAGAGAGCAGATCACTGGGAGTGGACAATTATTCTCAGAACAATTTCATTACAAGTCAAGGAATTCTTGTTTCTGCTTCTGCTGGAAACTCGGTTTTTCCTCGAACGGCTTGCAACGTTGCTCCTTGGATCTTCACTGTTGCTGCTAGCACGCATGCAGTGGAGCGAATGAGTTCTTTCAGAACTGAAACCATGTTGGACACAACTGCAATGGCTCTTTCAGCAATTGTTATTGCGAGTTACGTGGATTGGCCCAATTGCTTTGAAATGGATGCACAAACTGTTAGTTTGTTGCTGTCAAATGATGCTTGGATCGGATTCCTGCTAGATGAAGCTTCACGATTGATCACTGGCATGTTTGAAGTGTTAGCCACAAGTGTTGTATGCTTCATGACAGGCCTAAAGGATGTTTGTCAGATGGATAGTTTAAGGTTCTCGAATGCAAATCTTCTAAAACCAGGTTCCTACCAGGGAGCAGGCAACTATGACGATGACATGTGTCAGATGGATGATGAAGATGATATTTTCGCTGCATCATCAGTAAAAGCTAACCCTCTACTTGATGCTGACGACATAAAGAGTTTCAATCCAATGTGCGAGCCTGTGGAGGATGACTGGTCTTGCAAGTCAGACGAAACACTAAATTTGAAGAAGAGCAGACTGAACTTGTCCCCAGATCAAACTATTAGGATAACTATGAGTCCCAAACCATCTCCTAATGCAGAGAAGGAGATTTCATTTTCAAGTGAACCTCTTGGAGTTGAAGATGATGATGAAGTGACAGAGTGCAAAATTAGAGCTTTCCTGGATGACAAGGCATTCGAACTGAATAAGCTCCTACACGTCCTTAAATCAATTTAA 1164 0.4244 MLVLSSCLLLSLMPRNLLIRWQKVHQQPCHIVYTDYRPTPLQHYISPSESEGLYLVVDEKGKFREDSFHKALNALVPAADGDRKKRKCEVAKRRALVLQSYLESRSLGVDNYSQNNFITSQGILVSASAGNSVFPRTACNVAPWIFTVAASTHAVERMSSFRTETMLDTTAMALSAIVIASYVDWPNCFEMDAQTVSLLLSNDAWIGFLLDEASRLITGMFEVLATSVVCFMTGLKDVCQMDSLRFSNANLLKPGSYQGAGNYDDDMCQMDDEDDIFAASSVKANPLLDADDIKSFNPMCEPVEDDWSCKSDETLNLKKSRLNLSPDQTIRITMSPKPSPNAEKEISFSSEPLGVEDDDEVTECKIRAFLDDKAFELNKLLHVLKSI* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3251 387 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 227 384 - -
Psa6g3251 387 PANTHER MAP KINASE KINASE KINASE 227 384 - -
Psa6g3251 387 SUPERFAMILY Subtilisin-like 117 176 IPR036852 GO:0004252|GO:0006508
Psa6g3251 387 Gene3D Peptidase S8/S53 domain 119 153 IPR036852 GO:0004252|GO:0006508
Psa6g3251 387 Gene3D - 154 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3251 Psa-Chr6 281242601 281245934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3251 233 380 MAP Kinase Kinase Kinase AT3G06030 39.355 5.57e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3251 - - ccaj:109794823 151.754