Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3196 ATGTCGAAGCTAGTCTGCGTCACGGCGGCAGTGGATGCATCGGTTCATGGCTCGTCCATCTCCTCCTTCACCGCGGCTACACCGTTCACGCCACCGTCCAAAATCTCAGCTACCTTTCACACACTCTTTCTCCTTCAATCACACTTCAATTTAACACATTTCAAAGCTCTAACTCATTTCCACTTTCTTCTCAAAATCACAGACGATGACAACGAGACGAAGCATCTAGAAGCTCTTGAAGGAGCACAAACCAATCTCCGTCTCTTCCAGATCGATCTTCTCAACTACGACACAATCCTCGCCGCTGTACACGGTTGCGCCGGCGTTTTTCACCTCGCTTCGCCCTGCATTGTTGATAAAGTTCATGATCCTCAGAAGGAGCTTCTAGATCCTGCAATTAAAGGGACTGTGAATGTGCTTACTGCGGCTAAAGAAGCAGGGGTGAAGCGCGTGGTTATCACGTCGTCTATCTCTGCGGTTACTCCTAGTCCTGATTGGCCTTCTGATGTTATCAAGAGTGAGGATTGTTGGACTGATACTGAATACTGCAAAAAGAAAGAGTTGTGGTATCCATTGTCCAAGACACTGGCAGAGAAAGCTGCTTGGGATTTTTCCAAAGAAAATGGTTTGGACGTTGTTGTGGTGAATCCCGGTACTGTGATGGGACCTGTTATTCCACCAAGGATTAATGCAAGCATGCTCATGCTTGTTCGACTTATTGAAGGTTGTACTGAAACATATGAAGATTATTTTATGGGATTGGTCCACTTCAAAGATGTAGCATTGGCACATATTTTGGTATATGAAACCAAGGAAGCTACTGGCAGACATTTGTGTGTTGAAGCTATCTCTCACTATGGTGACTTTGCGGCAAAAGTTGCTGAACTTTATCCAGAATATAATGTGCCTAGGATAAAACGAGATACGCAGCCTGGATTGTTGAGAGCAAAGGATGGATCGAAGAAGCTCATGGATTTGGGTTTAGAATTCATTCCAATGGAGCAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGATCCATTTCTTGA 1056 0.4451 MSKLVCVTAAVDASVHGSSISSFTAATPFTPPSKISATFHTLFLLQSHFNLTHFKALTHFHFLLKITDDDNETKHLEALEGAQTNLRLFQIDLLNYDTILAAVHGCAGVFHLASPCIVDKVHDPQKELLDPAIKGTVNVLTAAKEAGVKRVVITSSISAVTPSPDWPSDVIKSEDCWTDTEYCKKKELWYPLSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRINASMLMLVRLIEGCTETYEDYFMGLVHFKDVALAHILVYETKEATGRHLCVEAISHYGDFAAKVAELYPEYNVPRIKRDTQPGLLRAKDGSKKLMDLGLEFIPMEQIIKDAVESLKNKGSIS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3196 351 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 61 342 - -
Psa6g3196 351 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 61 342 - -
Psa6g3196 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 345 IPR036291 -
Psa6g3196 351 CDD FR_SDR_e 61 328 - -
Psa6g3196 351 Gene3D - 61 351 - -
Psa6g3196 351 Pfam NAD dependent epimerase/dehydratase family 79 275 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3196 Psa-Chr6 276774175 276777615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3196 61 351 Monolignol Biosynthesis Gene Families AT5G58490 73.883 9.41e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3196 - - adu:107458329 507.679