Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3188 ATGGCTCGAGATGGCAGCGTTGTCCCTGCGGACCCACAGGCTATGGTTGTTGCGAAGAAGAAGACACAGTCTGCTAGAAGTTGGATTCTGTTTGATGCTACGGGCCAAGGGTCGATACTTGACGTGGACAAGTATGCTATCATGCATAGGGTTCAGATTAATGCACGTGATCTTAGAATCCTTGATCCCTTTCTCTCTTACCCTTCTACCATTCTCGGTCGTGAGAAGGCTATTGTTCTTAATTTGGAGCATATCAAGGCTATAATCACAGCTGAAGAGGTATTACTGCGAGATCCAACAGATGAACATGTGGTCCCTGTTGTTGAGGAACTGCAGAGGCGATTGCCTAAACTGGGAGCCATTCATCAACAACAAGGAGATGGTAAAGAGTATCTTGGTGGTCAAAATGATAACGAAGCTGCTGAAGAAGATGAGTCACCATTTGAGTTCCGTGCCCTGGAGGTAGCCTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGTACAACTGAGTTAGAGATGGCTGCTTATCCTGCATTAGATGAACTTACTTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACAAGGCTGACTGCTCGGGTTCAAAAGGTCAGAGACGAGCTTGAACAATTGCTGGATGATGACGATGATATGGCTGATCTATACCTTTCGAGAAAGGCAGGTTCAGCATCACCAGTTAGTGGATCAGGTCACGCAAATTGGTTTGCTGCCTCCCCAACCGGAGGATCAAAGATATCCAGAGCAAGTCGAGCAAGTATTGCAACAATGCGTTTAGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATGGTACATTAAACAAACTAACCACACTGCGAGAGTATATTGATGATACCGAAGATTACATTAACATTCAACTTGACAACCATCGTAATCAGCTTATTCAGTTGGAGCTCTTTCTTAGCTCTGGAACTGTTTGTCTATCTTTCTACTCTCTGGTGACAGCTATTTTTGGCATGAACATCCCATATTCTTGGAATGAAGACCATTCATACATGTTCAAATGGGTAGTTATCGTCGGAGGAGTAAGCTCTGCTATTATGTTTCTCATGATTACCCTCTTTGCTCTCAAAAAGGGGTTGGTTGGAACATGA 1182 0.4332 MARDGSVVPADPQAMVVAKKKTQSARSWILFDATGQGSILDVDKYAIMHRVQINARDLRILDPFLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDEHVVPVVEELQRRLPKLGAIHQQQGDGKEYLGGQNDNEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGHANWFAASPTGGSKISRASRASIATMRLDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVTAIFGMNIPYSWNEDHSYMFKWVVIVGGVSSAIMFLMITLFALKKGLVGT* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3188 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 392 IPR039204 -
Psa6g3188 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Psa6g3188 393 Pfam CorA-like Mg2+ transporter protein 265 381 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Psa6g3188 393 Gene3D - 14 99 - -
Psa6g3188 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 392 - -
Psa6g3188 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 380 IPR045863 -
Psa6g3188 393 Coils Coil 194 221 - -
Psa6g3188 393 Gene3D Magnesium transport protein CorA, transmembrane region 105 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3188 Psa-Chr6 275666911 275672580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3188 1 366 MRS2 Gene Family AT5G64560 80.707 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3188 K16075 - gmx:100810239 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3188 6 275666911 275672580 Psa6g3188 6 275666911 275672580 ECH