Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3180 ATGAAGAGGCCCCGGAAAGAATCATTCAGAGACATTAAAGCTAGTAACATATTGCTGGACGAGAAATTATATCCAAAAATCTCAGACTTCGGTTTGGCAAGGCTGTTTCCTGGAGAGGACACTCATGTGCAGACATTTAGGATTTCCGGTACACATGGTTATATGGCTCCTGAATATGCAATGCGTGGAGATCTGTCCGTAAAGACTGATGTTTTTAGTTACGGAGTCTTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGATGTGAAGCTTGGTTCAGAAAAGGCAGATCTACTAAGCTATGCATGGAAGCTTTATCAAGGAGGGAAAACTATGGATTTAATAGACCAGAGCATTGGTAAATACAATGGCGAGGCTGCAATGTGCATTCAGCTAGGTTTATTGTGCTGTCAAGCAAGTGTAGTGGAGAGACCTGATATGAATTCAGTTCATCTAATGCTATCAAGTGATTCATTCACTTTGCCAAGACCAAGTAAACCAGACTTCAGCGTCGTGTAG 522 0.4157 MKRPRKESFRDIKASNILLDEKLYPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYAMRGDLSVKTDVFSYGVLVLEIVSGRKNHDVKLGSEKADLLSYAWKLYQGGKTMDLIDQSIGKYNGEAAMCIQLGLLCCQASVVERPDMNSVHLMLSSDSFTLPRPSKPDFSVV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3180 173 Pfam Protein kinase domain 9 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3180 173 Gene3D Transferase(Phosphotransferase) domain 1 6 161 - -
Psa6g3180 173 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3180 173 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 169 - -
Psa6g3180 173 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 169 - -
Psa6g3180 173 SUPERFAMILY Protein kinase-like (PK-like) 9 165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3180 Psa-Chr6 274721087 274722207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3180 10 172 Receptor kinase-like Gene Family AT4G23150 49.697 3.93e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g3180 Pkinase 3.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3180 - - aprc:113868075 299.671