Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3131 ATGCCACAAAACTTATTATCTAATTCTGGCTTATTATTGCATGAGTCCTTGAGTCAGATGCAGACTCTCATAAAAGAGAATTCGATTAATAAGGATTGGATTTCTATAGGAGAACTTACTGATATTATCATCTCCATCCTTGAGAACTCTGATTCTATAGATGTCAAGATGAAGATCTTGATTACTTTGAAGGGTGCTGTTGAGGGGCATGCAAGAAACAAGGAAAAAGTGGTTGAATCTCAAGGATGGCGATACATTATTTCCTGCTTACACAATGACTCTAGAGTAATAAAGGAAGCAGTTGATTTGCTCTATGAATTGCTTCAAGACCGTTCTGGTTGGAATAAAAGTTTCTGCAAAAAACTTTCTGAGCATCCCAGCACGGTTAATTACCTTGTTACCATTCTAAATGGACCAGTCAGCGATTCAATTGAAACTGCAGAAAAGATTTTGACGGAGCTTTTTGAAACAGACGAGGAAAACATTTGCTGTGCTGCTAAGTTTGGCTGGTGCAAAGCACTTGTTGATCGCATGATTCAAGGTAGCAAGACATTCTTTTCCAGTTCGTCTTTGTTGCGTTGA 582 0.3832 MPQNLLSNSGLLLHESLSQMQTLIKENSINKDWISIGELTDIIISILENSDSIDVKMKILITLKGAVEGHARNKEKVVESQGWRYIISCLHNDSRVIKEAVDLLYELLQDRSGWNKSFCKKLSEHPSTVNYLVTILNGPVSDSIETAEKILTELFETDEENICCAAKFGWCKALVDRMIQGSKTFFSSSSLLR* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3131 193 Gene3D - 2 185 IPR011989 -
Psa6g3131 193 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 184 - -
Psa6g3131 193 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 184 - -
Psa6g3131 193 SUPERFAMILY ARM repeat 8 180 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3131 5 192 U-box Gene Family AT1G20780 27.604 6.74e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3131 - - gsj:114377374 276.559