Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3129 ATGACAGCAAAGGCAAGAGCAGCAGCATTCATTGGTGATCTTTCCATGAGCACTCCAAAGCTCACAGTTGTTTCAAAATCATCATTTTGCAGGTGTTTTCGATCATCACAAGCTCCTCTATGCTCGGCACACGGAAGTGTTTGCAATGTGAATTCCACATTTTGTCTTTTGGAAGCAAATGCACTACCTGGCTTGATTAAGCTGTTACAAGAGGAGGTTCATGCAACTGCTTATGAAGCCATACAGACACTTTCCACATTGGTTATAGAAGACTTTCCTCAGAGAGGACTCGTGCACATTGGCAGAAGTTCTTGGACTCTTAAGGCAGAAGTTCTTGGACTCTTGGAGAAAGTGTTTGTCTCAAAGGAAATGGTTGAATACTATGGATCAACGACTAGATTACGTCTATTCCATCTTACCGGCATGAATGTATACGGGGACGGCCACCTAAGGAGAAAAGCTGCCAGGGTACTGTCATTGCTGGAACACTATTCGAGATCGTCATCACATTCAATCACCGGAGTTGTGTTGAGTGAGAATCTACGCCTATGA 552 0.4384 MTAKARAAAFIGDLSMSTPKLTVVSKSSFCRCFRSSQAPLCSAHGSVCNVNSTFCLLEANALPGLIKLLQEEVHATAYEAIQTLSTLVIEDFPQRGLVHIGRSSWTLKAEVLGLLEKVFVSKEMVEYYGSTTRLRLFHLTGMNVYGDGHLRRKAARVLSLLEHYSRSSSHSITGVVLSENLRL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3129 183 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 172 - -
Psa6g3129 183 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3129 Psa-Chr6 269457741 269458394 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3129 4 84 U-box Gene Family AT1G68940 36.905 2.14e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3129 - - gmx:100783638 251.521