Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3121 ATGAACGCGTTTGATATAATATCGATGTCTTCGGGTTTGGATTTGAGTGGTTTGTTTGAAACTACATCGTTTAGAACTGAAAAGAGGTTTACTTCAAGTGAAGAAATTGGTGTGGTGGAAGAGAAAGTGAAGGAAATTGGAGGAGAATTAGGGTTTAGAGTTGAGATTGGGAAAAATGGAACAATTGGGTTGGGGAAAGGAAAGATTACTATGGTTGTTGAGGTGTTTAAGATTGTGGACAATTTGTTGTTGGTAGCACTTAAATTGGAGAATGGTGGAATGGAATTTGAAGAACTTCATTGGAATGATTGGAAAATTGGGCTTCAAGATGTTGTTATTTCTTGGCATAATTACGAGTCAAAATTTCCATTTTCTGGTATGGGACAGTGTTCAACGGTTGTAAATGGAAAGAATATTGGCGAGTGTTGTGTTGTTCCATTATTGTCTTGA 450 0.3667 MNAFDIISMSSGLDLSGLFETTSFRTEKRFTSSEEIGVVEEKVKEIGGELGFRVEIGKNGTIGLGKGKITMVVEVFKIVDNLLLVALKLENGGMEFEELHWNDWKIGLQDVVISWHNYESKFPFSGMGQCSTVVNGKNIGECCVVPLLS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3121 149 ProSiteProfiles NAF domain profile. 1 20 IPR018451 GO:0007165
Psa6g3121 149 PANTHER SERINE/THREONINE KINASE 19 118 - -
Psa6g3121 149 Gene3D Kinase associated domain 1, KA1 1 113 - -
Psa6g3121 149 CDD CIPK_C 2 109 - -
Psa6g3121 149 Pfam NAF domain 1 55 IPR004041 GO:0007165
Psa6g3121 149 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3121 Psa-Chr6 268914820 268915485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3121 1 117 CBL-interacting serine-threonine protein kinases AT4G14580 46.281 9.22e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3121 K12761 - gmx:100305372 171.014