Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3114 ATGGCCGAACCTTTGTTATTCACAGTGAAGAGACAAGCCCCTGAATTCGTAACTCCGTCAAAACCAACACCTCATGAAATCAAACTTCTCTCAGACATTGATGACCAAGACGGGTTACGTTTTCAAATTCCGGTGATTCAATTTTACAAGTATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTGTTCGAAAAGCGCTTGCGAAAACGCTTGTGTTTTATTATCCTTTTGCAGGTAGATTGAGAGAAGGTGTTGGGAGGAAACTTATGGTGGATTGTAATGAAGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTGGTTTGAAGGATTTTGGTGATGCTCTTCAGCCTCCGTTTCCTTGTTTGGAAGAGCTTCTTTTTGATGTTCCTGGTTCTTCAGAAGTGCTTAATACTCCATTGATGGTTATTCAGGTAACAAGATTAAATTGCGGCGGTTTCATTTTCGCGCTTCGGCTAAACCATACAATGGGCGACGCAGCGGGTTTAACTCAATTCATGAGCGCCCTAGGCGAAATATCTCGAGGAATGAAAGAACCGTCAATTCCACCATTATGGTGCAGAGAGCTTCTCAACGCAAGAAACCCACCAAAAGTAACATGTACTCATCGCGAATACGAACAAATAGCTGACCCTAAAGGAACCATTATCCCCTTAGACGACATGGCTCACCGCTCTTTCTTCTTCGGTCCCACTGAACTAGCCGCAATCCGCGCTCTTCTTCCGCATCACCAACAAAAACGCTCCGATTTCGAAACACTAACCGCATGCCTTTGGCGTTGTCGCACAATTGCTTTACAGCCAGACGCAGACGAAGAAGTTCGTATAATCTGCATCGTTAATTCACGAAGCAGATTTAATCCACCTTTACCAAAAGGTTTCTACGGTAATGCTTTTGCGTTTCCCGTCGCTGTTACAACGGCGGGAAAGCTAATAAAAAATCCAATGGGATACGCATTGGAGTTAGTTCAAAAAGCAAAAGGTGATGTCACTCAAGAGTATATGCATTCGGTTGCGGATCTAATGGTTCTCAAGGGTCGACCTCACTTTACCGTAGTGAGGTCGTTTCTTGTGTCAGACGTGACACGTGCTGGGTTTGGAGATGTTGATTTTGGTTGGGGAAAAGCTGTTTATGGAGGACCAGCAAAAGGAGGAGTAGGTGCTGTTCCTGGTGTTGCTAGCTTTTATATACCTTTTGTAAATGGTAAGGGAGAGAAAGGTTTGGTTATTCCGGTTTGTTTGCCAGCTCAAGCTATGGAGAGGTTTGTTGAAGAGTTGGATAGTGTGGTTAATAATAGCAATGTTACAAAACCTACTAAGAGTGGTCCAGGATCTGGTTTCATTACTTCTTCTTTGTAG 1383 0.4353 MAEPLLFTVKRQAPEFVTPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPNMAGKDPVDVVRKALAKTLVFYYPFAGRLREGVGRKLMVDCNEEGVLFIEADADVGLKDFGDALQPPFPCLEELLFDVPGSSEVLNTPLMVIQVTRLNCGGFIFALRLNHTMGDAAGLTQFMSALGEISRGMKEPSIPPLWCRELLNARNPPKVTCTHREYEQIADPKGTIIPLDDMAHRSFFFGPTELAAIRALLPHHQQKRSDFETLTACLWRCRTIALQPDADEEVRIICIVNSRSRFNPPLPKGFYGNAFAFPVAVTTAGKLIKNPMGYALELVQKAKGDVTQEYMHSVADLMVLKGRPHFTVVRSFLVSDVTRAGFGDVDFGWGKAVYGGPAKGGVGAVPGVASFYIPFVNGKGEKGLVIPVCLPAQAMERFVEELDSVVNNSNVTKPTKSGPGSGFITSSL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3114 460 Gene3D - 213 433 IPR023213 -
Psa6g3114 460 Gene3D - 8 212 IPR023213 -
Psa6g3114 460 Pfam Transferase family 11 434 - -
Psa6g3114 460 PANTHER - 7 443 - -
Psa6g3114 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3114 Psa-Chr6 266474397 266476843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3114 40 430 Monolignol Biosynthesis Gene Families AT5G48930 30.000 7.93e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3114 K19861 - gmx:100797017 727.243