Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3110 ATGGAGCTTCACAGCCATTTTTCAAACTTTACCTTCATGGCAATATCCGTTCTCTCCCTCTTGGTACTATTTAAAATACTTAAAAGCTTGAGTAGTTCGAAAACATCTAACACCAATTTACCACCAGGGCCATGGACACTGCCCTTCATAGGGAACATACATCAGATTATTAGCAGCTCATTGCCTCATCATTCCCTCAAAAATTTGGCACAAAAGTATGGACCTTTGATGTTCCTAAAACTTGGTGAGGTACCCTACATAATAGTTAGTTCACCCGAAATCGCCAAAGATATTATGAAAACACATGACCTCAGCTTTTGTGATAGGCCAAATCTTATGACGTTCACAATATTTAGTTACAACGCTACCGATATTATCTTCTCTGCATTTGATGAACACTGGAGGCAATTACGGAAGATGTGTGTTATGGAGCTGTTGAGTGTAAAGCGTGTCCAGTCGTTTAGGTCGATAAGAGAAGAAGAGGTGTTAGATCTTGTTAAATCAATAACTGCAAGTGAGGGATCAGTTGTTAATCTCTCTCATAAGGTTTTTGAAATGACGTTTGGGATAACGGCTCGGGCAGCTTTTGGAAAAAGAAGTAAACATCAAGAAGCATTCAGATCAGCACTCGATGAAATGTTAACTTTGATGGGAGGGTTTTGTATTGCTGATTTGTATCCTTCTATTAAAATACTTCAAAAGATGAGTACCGTAAAGAAGAAATATCAAAAACTTCACAATGAAATTGATATGATAATGCAAGATATTATAGACGAGCACCAAAGCATTCAGCGGGAACCAGGCAGGGATGAAGATATAGTCGATGCTCTTCTCAAGATTCAACACGAAAATGAACACTCACAACATCGCATTACTGATGTAACTATGAAATCAATCATTCTGGACATTTTTGCTGCTGCTACTGATACATCGTCCGGGACTGTGTTATGGGGTATGTCTGAGATGGTAAAGAATCCAAAGGTAATGGAAGAAGCACAAGATGAGGTAAGAAGAGTGTTTGATAAAAAAGGGTATGTAGATGAGACAGAGCTGCACAAATTGACATATTTAAAGTCTGTCATAAAAGAAACACTAAGGTTGCATCCTATGATACCTATGTTACTTCCAAGAGAAAGTAGAGAGAGATGCAAAATCAATGGGTATGAGATTCCTGCTAAGACAAGGGTGTTGGTCAATGCTTGGGCTATTGGAAGAGATCCAAAGTATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGGTTTGTGAATAACACAACTGATTTCAAAGGCACGGACTTTGAATTCATACCATTTGGTGCTGGGAGAAGGATGTGTCCAGGAATTGCATTTGCCTTACCCAATGTTGAACTGCCTCTTGCTCAATTACTTTACCACTTTGATTGGAAGCTTCCCAATGATATGAAGAATGAAGAACTCGATATGACTGAGTCATTTGGGATAACAGCAGAAAGAAAAGATGACCTATGTTTGATTCCTATTGTTCGCTGTCTTTGA 1515 0.3875 MELHSHFSNFTFMAISVLSLLVLFKILKSLSSSKTSNTNLPPGPWTLPFIGNIHQIISSSLPHHSLKNLAQKYGPLMFLKLGEVPYIIVSSPEIAKDIMKTHDLSFCDRPNLMTFTIFSYNATDIIFSAFDEHWRQLRKMCVMELLSVKRVQSFRSIREEEVLDLVKSITASEGSVVNLSHKVFEMTFGITARAAFGKRSKHQEAFRSALDEMLTLMGGFCIADLYPSIKILQKMSTVKKKYQKLHNEIDMIMQDIIDEHQSIQREPGRDEDIVDALLKIQHENEHSQHRITDVTMKSIILDIFAAATDTSSGTVLWGMSEMVKNPKVMEEAQDEVRRVFDKKGYVDETELHKLTYLKSVIKETLRLHPMIPMLLPRESRERCKINGYEIPAKTRVLVNAWAIGRDPKYWVEAESFKPERFVNNTTDFKGTDFEFIPFGAGRRMCPGIAFALPNVELPLAQLLYHFDWKLPNDMKNEELDMTESFGITAERKDDLCLIPIVRCL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3110 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 Pfam Cytochrome P450 41 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PANTHER CYTOCHROME P450 71D10 13 502 - -
Psa6g3110 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Psa6g3110 504 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 PANTHER CYTOCHROME P450 71B11-RELATED 13 502 - -
Psa6g3110 504 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3110 504 Gene3D Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3110 Psa-Chr6 265140832 265142918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3110 34 502 Cytochrome P450 AT3G26280 43.568 1.23e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3110 - K23806 gmx:606548 624.394