Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3104 ATGCAACTTTTCACATCACTTATTAATTCCTGTTTAAATTCTTCTCTCCCCTTCATTATTTCTCTCCTCCTTTTCTCTTGTTTCTCTCTTCTCCTTCAATGGTGGAAACACCATAGACATAAAGACAAACATTTACCCCCTGGTTCTATGGGTTGGCCTTACTTTGGAGAGACCCTCAAACTCTACACACAAAATCCAAATTCATTCTTCTCCTCAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCTAGTCCTGAGGCAGCAAGAACAGTGCTTGTGACTCAAGCACATCTTTTTAAACCAACATACCCTCCAAGCAAAGAGAAGATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCACTCCATGCTCAAGAAGATGGTTCAAGCCTCTTTTTCACCTTCCACAATTAAAGACTCTGTCTCTCATGTGGACCAAATTGTACAAAAAATGGTCCCATCTTGGACTAACAGAACCATCAACACATTGGAAGAAATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCTTTTGGTGAAATAAAGGAAATGGAAATGGAAGAAATAAGAGAGTTGTATCATTGCTTGGAGAAGGGCTACAATTCTTATCCTTTAAATCTTCCCGGAACTTCCTATTGGAAGGCAATCAAGGCGAGGAAGGTTTTGAATGAGATTATAAGGAAGATAATGGAAAGAAGGAAGGAGAGCAGAAACTATGGAGGAGGGTTGTTGGGAATTCTGTTGAGAGGAGGCAGAGGTGATCAACAACAACAACAACAATTGACTGATTCTCAGGTTGCTGATAATCTCATTGGTGTGATCTTTGCTGCACATGATACCACAGCCAGTGTTCTAACATGGGTTCTTAAGTACTTGCATGACAATCTCAATCTCTTAGAAACCGTCACAAAAGAACATGAAGGAATCAAAAACAAACTCATTAAAGAAAACCGCGGACTTTCATGGGAGGATACAAGGCAAATGCCATTCACTACCAGGGTGATCCAAGAGACGTTAAGAAGTGCAAGTATATTATCATTCACATTTAGAGAAGCAGTACAAGATGTGGAACTAGAAGGTTACACAATTCCAAAAGGTTGGAAAGTGCTTCCATTGTTTAGATCCATTCATCACTCACCTCATTTCTTTCCTCAACCACACAAGTTTGACCCTTCAAGATTCGAGGTTCCACCTCGGGCAAACACATATATGCCATTTGGAAGTGGAGTCCACTCATGTCCAGGTAGTGAGCTTGCTAAGCTTGAGGTTCTTGTTCTTCTCCATCATCTCACCCTTAAGTACAGGTGGGAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCTTTTCCTGTGCCAAAAAATGGATTACCACTAAAGATAACTTTAAACAAGAGATAG 1446 0.4011 MQLFTSLINSCLNSSLPFIISLLLFSCFSLLLQWWKHHRHKDKHLPPGSMGWPYFGETLKLYTQNPNSFFSSRQKRYGDIFKTHILGCPCVMISSPEAARTVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKMVQASFSPSTIKDSVSHVDQIVQKMVPSWTNRTINTLEEMKKYAFEVAANSAFGEIKEMEMEEIRELYHCLEKGYNSYPLNLPGTSYWKAIKARKVLNEIIRKIMERRKESRNYGGGLLGILLRGGRGDQQQQQQLTDSQVADNLIGVIFAAHDTTASVLTWVLKYLHDNLNLLETVTKEHEGIKNKLIKENRGLSWEDTRQMPFTTRVIQETLRSASILSFTFREAVQDVELEGYTIPKGWKVLPLFRSIHHSPHFFPQPHKFDPSRFEVPPRANTYMPFGSGVHSCPGSELAKLEVLVLLHHLTLKYRWEVVGNGDGIQYGPFPVPKNGLPLKITLNKR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3104 481 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 21 477 - -
Psa6g3104 481 Gene3D Cytochrome P450 36 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PANTHER CYTOCHROME P450 26 21 477 - -
Psa6g3104 481 SUPERFAMILY Cytochrome P450 38 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 Pfam Cytochrome P450 46 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Psa6g3104 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3104 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3104 Psa-Chr6 264386486 264389948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3104 18 473 Cytochrome P450 AT3G19270 56.114 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3104 K09843 - gmx:100782541 734.561