Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3099 ATGACAAGAGAAGGTTGTCAGAACGCCGCCTCCACACCTGCTTCTCAGTCAACATCAATGAAGGAACCACATGTTTCTTTGGATCTTCTGGTAGAAATCTTGTCCAAGCTTCGCGTGAAGCAGCTCATTACTCTCCGTTGCGTCTGCAAAGCATGGAATGATCTCATCTCTGGAGATTCCAACTTGGCCAAGAAGCATCTTCTTGTATCAACCTGTAACCAAGACTGCCACCACATCATCACAAGCTCTCAGCACATGCCACCTGAGTTTCTTCTATCTGGTTCCCCATTCACCTCAATCTTCGGCCCCACGTCGCACCCTACACAGTTCAGGTTACCTAATTGTGTTGGTATTTTGTGCAATCCTTCAATTAGAAAGTTAAAGATATTGCCACCTCTAAATTCTTCTGTAATATCATATACATTAGGGTATGATTGCAATAACTATAAAGTTATTGCTCTTACTAAGGGCATTGGCAGAGTACACGTCCATGTTCATGCATTTGGCACAGATTCTTGGAGAATGATTGAGGACTTCCCAGATCCTAACTTCATAAGTTATGCACCGGGAACCATTCTCAATAACTACGTTAATTGGTTGGCATCTGGATTTATAGTTTCTCTTGATTTAAAGTCGGAGTCATATCAAAAAATTTCATTGCCTGCTGATATCCGTATCCCTAATAGTACCATAGGCACATTCAGTGGTTGTTTGTCCCTCGTTACTGACAGGTTTGGTCTTGGGTTTCTTACTGTTTGGATAATGAAGGAATTTGGAAATGGTGATTCTTGGAGTATCCGTGTAGATGTTCCTCCCGGGGTGATTATGGCCATAGGATATTATGTGATTCAGAAGATGCCGTGTTGCTGCAGTGGCGCAAGAGGGAGAAACTTAAGTTGA 900 0.4256 MTREGCQNAASTPASQSTSMKEPHVSLDLLVEILSKLRVKQLITLRCVCKAWNDLISGDSNLAKKHLLVSTCNQDCHHIITSSQHMPPEFLLSGSPFTSIFGPTSHPTQFRLPNCVGILCNPSIRKLKILPPLNSSVISYTLGYDCNNYKVIALTKGIGRVHVHVHAFGTDSWRMIEDFPDPNFISYAPGTILNNYVNWLASGFIVSLDLKSESYQKISLPADIRIPNSTIGTFSGCLSLVTDRFGLGFLTVWIMKEFGNGDSWSIRVDVPPGVIMAIGYYVIQKMPCCCSGARGRNLS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3099 299 Gene3D - 13 62 - -
Psa6g3099 299 SMART fbox_2 25 65 IPR001810 GO:0005515
Psa6g3099 299 TIGRFAM F_box_assoc_1: F-box protein interaction domain 118 273 IPR017451 -
Psa6g3099 299 PANTHER OS02G0783600 PROTEIN 24 277 - -
Psa6g3099 299 SUPERFAMILY F-box domain 26 70 IPR036047 GO:0005515
Psa6g3099 299 Pfam F-box domain 25 61 IPR001810 GO:0005515
Psa6g3099 299 PANTHER PROTEIN, PUTATIVE-RELATED 24 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3099 Psa-Chr6 264250838 264251833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3099 139 294 Carbohydrate Esterase AT1G25141 25.281 1.53e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3099 - - mtr:MTR_1g115185 178.718