Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3090 ATGACCTTGTTTGAGTGCATTTCATTATTTGTAGCCATTCTCTTCATCACATTCTACATTATATGGAGACGCAACAAAAATGTTCTTACACCAAACTGGCCAATCATTGGCATGCTACCATCTATTTTCCATAATTACTCACGCATTCATGATTTTTTAACATTAATTGTGAAACATCATGGAGGCACTTTTCATTTTAAAGGTCCTTGGTTCACAAACATTGCCACCTTTATCATCACTAGTGATCCCATGAATCTGCACCACATCCTCAGCAAGAATTTCATCAACTATGGGAAAGGAGCTGATTTCCATGAGATATTTGAATTACTTGATATTCTTGAAAGGTTCACCTTTGACATCACCTCTACCTTTTTATTTGGATTGGATCCTAATTGTCTTGATCCTTACAAATTCAATGAATTATCAGGTATCGCTTGTTTAAAAGCTGTGTCTGAGATTGAGGAAGTGGCTTTGTCCAGACACTTTATTCCAAAATGTATTTGGAAGCTACAAAGATGGCTGCAGATTGGTCTAGAGAAGAAGTGCAAGGTAGATGAAGAAAATATTTCCCGATTCTTGCACAGATGTATAACTTATATCAAAGTTAATGAAGATGTGGATGAATCTCATTCTTGCTTTATAAAAGAATTAATGAGGGAAGGATTGGGAAAGGGGGAAAAGACTGAGAAGTATATTACAGACACTGCACTCAATCTCTTACTTGCAGGAAATGGAACTATTAGTACAGGTCTCACTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATCGTGGAAGCTAAAATCATTCAAGAGATCAAAGATAACTATTTAGCTCAACAGGAGAATTCTATTACAAATTTAAGTATGGAAGACTTTGATAAGCTAGTGTATCTTCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCACCTGTTGCATATCAGCACAAGTGTGCAGTCAAATCTGATGTACTACCTAGTGGAGACCATGTTAGGGCAAATACAAAGTTAATATCTTCTTTCTATGCAATGGGAAGGATGGAAGAAATATGGGGAGAGGATTGCTTGGAGTTTAAGCCAGAGAGATGGATAGCAGATAATGGACAGATTATACATGTTCCGTCTTACAAGTTCATAACATTCAATGCGGGTCCAAGAAGTTGTATTGGAAAAGGTATTAGCTTTGTTGAAATGAAGATGGTAGCTGTTTCTATGTTATGGAAGTTTCACATACAGGTGGTGGAAGGTCATTCTGTAACTCCAAGGATTTCTGTTCTTCTTCGTATGGAACATGGTCTTAAGGTGAATATCAGTAAAAGATGCATTTGA 1329 0.3679 MTLFECISLFVAILFITFYIIWRRNKNVLTPNWPIIGMLPSIFHNYSRIHDFLTLIVKHHGGTFHFKGPWFTNIATFIITSDPMNLHHILSKNFINYGKGADFHEIFELLDILERFTFDITSTFLFGLDPNCLDPYKFNELSGIACLKAVSEIEEVALSRHFIPKCIWKLQRWLQIGLEKKCKVDEENISRFLHRCITYIKVNEDVDESHSCFIKELMREGLGKGEKTEKYITDTALNLLLAGNGTISTGLTWFFWLVSTHPIVEAKIIQEIKDNYLAQQENSITNLSMEDFDKLVYLHGAICEALRLYPPVAYQHKCAVKSDVLPSGDHVRANTKLISSFYAMGRMEEIWGEDCLEFKPERWIADNGQIIHVPSYKFITFNAGPRSCIGKGISFVEMKMVAVSMLWKFHIQVVEGHSVTPRISVLLRMEHGLKVNISKRCI* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3090 442 Pfam Cytochrome P450 102 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 Gene3D Cytochrome P450 29 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 381 390 IPR017972 GO:0005506|GO:0016705
Psa6g3090 442 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 110 - -
Psa6g3090 442 PANTHER CYTOCHROME P450 FAMILY PROTEIN 109 437 - -
Psa6g3090 442 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS P450 superfamily signature 379 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS E-class P450 group I signature 231 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS E-class P450 group I signature 378 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PRINTS E-class P450 group I signature 388 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3090 442 PANTHER CYTOCHROME P450 109 437 - -
Psa6g3090 442 PANTHER CYTOCHROME P450 11 110 - -
Psa6g3090 442 SUPERFAMILY Cytochrome P450 19 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3090 Psa-Chr6 263194599 263196107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3090 1 440 Cytochrome P450 AT2G23180 35.907 1.24e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3090 - - cam:101494575 497.278