Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3088 ATGGTCTTGTTTGAGTATATCACTTTATTTCTAACCATTCTCTTCCTCATAATCTACTACACGTGGAGACGCAACAAAAATGTAGTTATACCAAATTGGCCTATAATTGGCATGCTACCATCAATTTTGTATAATCAATCCCGTATTCATGATTTTGCAACATTACTTGTGAAACATCATGGAGGCACTTTTCATTTCAAAGGACCTTGGTTCACAAACATTGCTAACTTTATCCTCACTGGTGATCCCATGAATGTTCAATACATTACTAGCAAGAATTTCAGCAACTATGGGAAAGGGATTGATTTCCATGAGATTTTCGAAAACCTTGGTTTTGGTATTTTCAATTTGGATTCCAATGAATGGAAGCAAGAGAGAGCACTACTTCATTCATTGCTCAAAACAAAAAGTTTTGAGATATCACTTCATCAAAACATTCAACAGAAGCTAGAGAATTGGCTATTACCATTTCTCGATCATCATGCAACCAAAGGTGAACAAGTGCTTGATTTACAAGATATTCTCGAGAGGTTTACCTTTGATATAAGTTGCACTTTTTTATTTGGTTTTGATTCCGTTTGCCTTCCTTATAATTTCAATGAAGTCTCAGATATTGCTTATGTAAAAGCGATTTCTGTGCTTGAGGATACAATGTTGTATAGGCATTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGATAGCTCAACAGAACTTTGAACAATTCCTGTCTAAATGTGTAGCTACATGCAAAGGTGATGAAGAGAAAAGAAGATTGAGAAGCAATGAAGATGTTGATGAAAGTCGTTCATGCTTGCTAAAGGAACTAATAATGAAGAGAGGCTTAGGAAAGGATGAAATGGTTGGAAATGAGAAGCATATTAGAGACACTGCTGCCAATCTCTTGAGTGCAGGAAGTGCAACTATTAGCTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATGGTGGAAGCTAAAATCATTGAAGAGATCAAAGATAACTATTTAGCACAAGAGTTGAATTCTATTACAAATTTAAGAATGGAAGACATTGTTGATAAGCTAGTGTATCTTCATGGAGCAATATGTGAAGCCTTAAGGCTTTATCCACCTGTACCATTTGAGCACAAGTGTGCAGTCAAATCTGATATACTACCTAGTGGAAACCATGTTAGGGCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAAGAAATATGGGGAGAGGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCAGATAGAGGACAGATTATACATGTTCCATCTTACAAGTTCATAGTATTTAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATATTAGCATAATTCAAATGAAAATGATTGCAGCCGCCATGTTATGGAAGTTTAATATAAAGGTGGTGGAAGGTCAATCTATAACTCCAAGGGTGTCTATTGTCCTTCGCATGAATGATGGTTTTAAAGTCAAAGTCAGTAAAAGAAGCATATGA 1551 0.3578 MVLFEYITLFLTILFLIIYYTWRRNKNVVIPNWPIIGMLPSILYNQSRIHDFATLLVKHHGGTFHFKGPWFTNIANFILTGDPMNVQYITSKNFSNYGKGIDFHEIFENLGFGIFNLDSNEWKQERALLHSLLKTKSFEISLHQNIQQKLENWLLPFLDHHATKGEQVLDLQDILERFTFDISCTFLFGFDSVCLPYNFNEVSDIAYVKAISVLEDTMLYRHYIPKCIWKLQKWLQIGQEKKNKIAQQNFEQFLSKCVATCKGDEEKRRLRSNEDVDESRSCLLKELIMKRGLGKDEMVGNEKHIRDTAANLLSAGSATISSGLSWFFWLVSTHPMVEAKIIEEIKDNYLAQELNSITNLRMEDIVDKLVYLHGAICEALRLYPPVPFEHKCAVKSDILPSGNHVRANTKLIYSLYAMGRMEEIWGEDCLEFKPERWISDRGQIIHVPSYKFIVFNAGPRSCLGKDISIIQMKMIAAAMLWKFNIKVVEGQSITPRVSIVLRMNDGFKVKVSKRSI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3088 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 Pfam Cytochrome P450 31 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 PANTHER CYTOCHROME P450 15 511 - -
Psa6g3088 516 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 SUPERFAMILY Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3088 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Psa6g3088 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3088 Psa-Chr6 263087577 263089127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3088 1 515 Cytochrome P450 AT2G23180 40.962 1.86e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3088 - - cam:101494575 693.345