Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3084 ATGACCCTTAAACTAGGCCAAATAACCACTGTAGTTATGTCCTCATCAGAAACCGCCAAGTCAGTTCTTCAAATCCAGGACCAATATCTCTCTAACAGAACTGTCCCTGACGCAATGAGAGGTGCTAACCACGACAATTACAGTTTACCGTTCATCCCTCTATGTCAACGCTGGAAAGACCTCAGAAAAACCTGCAATAACTTGCTATTCTCCAACAAAAACCTCGACTCGAATCAAACTCTCCGACACAAGAAGCTTCTAGAACTTTCAAACAATATATATGTCAGCGCTGCAAAATTTGAAGCGGTAAATATCGGAAGACTCGCTTTTAAAACAACGATAAACATGTTGTCGAATACGATTTACTCAGTTGATTTTGTTCAGTCGAGTGATAAAGCTGGTGAGTTTAAAGAGTTGGTTACGAATATTATGATGGAAGTTGGAAGAGCAAATGTTGCTGATTGTTTCCCAGTGTTGAAGATTTTCGATCCTGTTGGTATTAGAAGAAGAACCGGTGAGTATTTTGGGAAGTTGTTAGATAATTTTAGAGGGTTGGTTGATGAAAGGTTGAAGATGAGAAAGTTGAAGGGTTATTATGGTAAAAGTGATATGTTGGATACTATGCTTAATGATGAGAATAACAATGGAGAGATGTATGAAGATAAGATTGAACGTTTATCTGTGGACTTGTTTGTGGCAGGAACTGACACAGTGACTTCAACAGTAGAATGGGCAATGGCTGAATTACTTCGCAACCCAAACGTTATGTCAAAAGCGAAATCAGAGTTAAACCAGCTTATTGGCAAAGGAAACTTAGTTGAGGAATCAGACATAGCAAAACTCCCTTACTTACAAGCAATAGTAAAAGAAACTTTCAGATTACACCCAGCAGTTCCACTTTTACTACCAAGAAAAGCTGAAATAGAGTTAGAGATAAATGGCTATAAAGTGCCAAAAGGTGCACAGGTGTTGGTGAATGTTTGGGCTATTGGGAGAGATCCAAATTTATGGGACAATCCAAATGAGTTTTTACCGGAGAGATTTTTGGGGTCAGATATTGATTTTAAAGGTAGAAATTTTGAGTTGACACCTTTTGGTAGTGGGAGAAGAATTTGTCCTGGTTTACCATTGGCTATAAGGGTGTTGTTTTTGATGTTGGGTTTGTTTATTAACTGTTTTGATTGGAAACTTGAGGGTGGAATCAAACCTGAGGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAAGCTCAACCTTTGCTGGCTATTCCAATTAAAGTAAGCAATTGA 1296 0.3804 MTLKLGQITTVVMSSSETAKSVLQIQDQYLSNRTVPDAMRGANHDNYSLPFIPLCQRWKDLRKTCNNLLFSNKNLDSNQTLRHKKLLELSNNIYVSAAKFEAVNIGRLAFKTTINMLSNTIYSVDFVQSSDKAGEFKELVTNIMMEVGRANVADCFPVLKIFDPVGIRRRTGEYFGKLLDNFRGLVDERLKMRKLKGYYGKSDMLDTMLNDENNNGEMYEDKIERLSVDLFVAGTDTVTSTVEWAMAELLRNPNVMSKAKSELNQLIGKGNLVEESDIAKLPYLQAIVKETFRLHPAVPLLLPRKAEIELEINGYKVPKGAQVLVNVWAIGRDPNLWDNPNEFLPERFLGSDIDFKGRNFELTPFGSGRRICPGLPLAIRVLFLMLGLFINCFDWKLEGGIKPEDMNMDDKFGLTLEKAQPLLAIPIKVSN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3084 431 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS P450 superfamily signature 363 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 430 - -
Psa6g3084 431 SUPERFAMILY Cytochrome P450 2 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 Gene3D Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 Pfam Cytochrome P450 1 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 430 - -
Psa6g3084 431 Coils Coil 209 229 - -
Psa6g3084 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 365 374 IPR017972 GO:0005506|GO:0016705
Psa6g3084 431 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS E-class P450 group I signature 285 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS E-class P450 group I signature 326 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS E-class P450 group I signature 362 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3084 431 PRINTS E-class P450 group I signature 372 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3084 Psa-Chr6 262669277 262671141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3084 1 428 Cytochrome P450 AT2G45570 48.966 2.60e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3084 - K23810 lja:Lj2g3v0039250.1 665.996