Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3080 ATGTGTATTGAACAGCTGCAGTTGTTGTTGGCAAATGCTCAGAAGGGAGGTGTACATGCTTTGGCAGCAGCCCCTAATCACGATATAGTGTTCTTTGCCGGTTCTGATGGAAAGGTTATCCTGTATAAACTGTCTTCGTCAACCATGAAAAAAAGAAAGGGTCAGTTGGCTAATTATGCCACTCTCACCTGTAATTGCTCTCATAGTAGAAAGTCTTTGAAGCTTGCACTGCCGGCGATCTCTTGTGGGCAACCATTTGTTCCAATGACATCACAGCAATTTGGACATGCTGTTCTTTCGTCTAATGTCGGGGTGCCTGTTATTCAGGGTCAGCAATTGCAGTATTCTCAACAAATGCAACAGCTGCCTCCAAGACAAATTCAGCCCGGTCATCTCGTTTCTTCACCGCAGGACCTCAAACTTACAGCTTGTATTCATTCCGGTCTTGTAGCACAAGGGGCAATGCTGACTGTCTTGAGTGCACTTTTAACTGCATTGGCTTGCCCAACTGCATTTCGTTCAGCTACTGATTTCATAGACAGCATATGGCATCCCATGACTCAAATGCATCTGCATCGACTACGACAAGCCCCCGTTGTGGGACTTCTCCACCAGAACTCTATGAATGCTAGGCAGCAAAATTCAGTGAACAATGCAAGCAGTCCATATGGAGGTAATTCTCCCCATATTCCATCCCCAAGTTCATGCAGTACAGTGGCACAAACGCAACCAAACTCGTCCCCTTTTCATTCACCGACACTGTCTTCCTCTGACAACCCACAAAAAATCCTCATCCAGGCATATCATCTGCAAATTCTATGGCGGCCTCAGTCACGGTAA 840 0.4607 MCIEQLQLLLANAQKGGVHALAAAPNHDIVFFAGSDGKVILYKLSSSTMKKRKGQLANYATLTCNCSHSRKSLKLALPAISCGQPFVPMTSQQFGHAVLSSNVGVPVIQGQQLQYSQQMQQLPPRQIQPGHLVSSPQDLKLTACIHSGLVAQGAMLTVLSALLTALACPTAFRSATDFIDSIWHPMTQMHLHRLRQAPVVGLLHQNSMNARQQNSVNNASSPYGGNSPHIPSPSSCSTVAQTQPNSSPFHSPTLSSSDNPQKILIQAYHLQILWRPQSR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3080 279 PANTHER LIM DOMAIN-BINDING PROTEIN 198 262 IPR029005 -
Psa6g3080 279 MobiDBLite consensus disorder prediction 221 256 - -
Psa6g3080 279 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 198 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3080 Psa-Chr6 261648001 261649287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3080 199 239 C2H2 Transcription Factor Family AT1G43850 54.762 7.67e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3080 - - peu:105127706 101.679