Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3014 ATGGATTCTCAAATTTTAGACTTATTAGCCCTTGTCTCCCTTTTCCTCTTCATCCTTGTGTCACTAAGTATTGGGAGGAATCTCATGAAAAAAGGCTCAGCTCCAAACCTACCCCCAGGACCATGGAAGCTACCTATTATAGGACACATACACCATCTAGTTACCTCTACACCGCATCGAAAACTAAGAGACTTGGCTAAAATACATGGACCCTTGATGCAACTACAACTTGGAGAGATCTGTGCAGTTGTTGTTTCCTCACCAGATTATGCTAAGGAAGTACTTAAGACCCATGATATCGTATTTGCATCTAGGCCTAAAATTGTAGCTGCGGATATACTATCATATGGATGCACAAATATTGCATTTTCACCTTATGGAAATTATTGGAGAAAACTGAGAAAAATATGCACAATGGAGCTTCTCACCCAAAAACGTGTCAGTTCATTTCAGCCAATAAGAGAAGAAGCGCTAACAGATCTCATCAAAAAGATTGATTCACAGCAAGGGTCACCCATCAATATCACTAAACTTGTAGTTTCATCAACATTTTCTATCATTGGAAGGGCTGCATTTGGCAACGAATGCAGAGTCCCAGAAGAGCTTGCTTCTTTGGGAAATGGAGAATCAGTTGCTGGTGGTTTTGACATTGCTGAACTGTTTCCTTCAGCTAAATGGGTCCAACTTGTTTCTGGTTTGAGGCCAAGACTTGAGAGGTTGCATAGACAAATTGACGAGTTACTAGAAAAAGTCATCATTGAACATAAAGAAGCAAAGTCAAAAGCAAAACAAGGCCAAGGTGAAGCAGACGAAGATCTAGTCGATGTTCTTCTAAATTTTCAAGGTGGTAATGATAGTGATGAAGATATATGCTTAACTGACAACAACATCAAAGCTATAATCCTGGACATCTTTGGTGCTGGAGGTGATACATCAGCTTCTACCATAGTTTGGGCGATGTCAGAGCTGATAAGAGATCCAAGAGTGATGAAGAAAGCACAACATGAAGTGAGAGAAATCTTCAACACGAGAGGAAATGTTGGTGAAAACTGCATAAATGAACTCGAATATTTGAAGTCAATTGTGAAAGAGACGTTAAGACTGCACCCTCCGGCTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATAGATGGGTATCATATCCCAGTCAAAACCAAAGTGATAGTCAATGCATGGGCAATTGGAAGAGATCCAAAGTATTGGACTGAACCAGAGAGATTCTATCCGGAGAGATTCATTGGTAGCTCGATTGACTACAAAGGGAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATGTGCCCGGGGATCACATTCGGTTTGATAAATGTTGAGCTATCCCTTGCATTCTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGGATGAAAGGTGAGGATTTGGACATGGCTGAGCAATTTGGAGCGACTATCAAAAGAAAAGATGATTTGTACTTAATACCCACTGCTCCTATTCCTTCTGTGGTTTGA 1527 0.4054 MDSQILDLLALVSLFLFILVSLSIGRNLMKKGSAPNLPPGPWKLPIIGHIHHLVTSTPHRKLRDLAKIHGPLMQLQLGEICAVVVSSPDYAKEVLKTHDIVFASRPKIVAADILSYGCTNIAFSPYGNYWRKLRKICTMELLTQKRVSSFQPIREEALTDLIKKIDSQQGSPINITKLVVSSTFSIIGRAAFGNECRVPEELASLGNGESVAGGFDIAELFPSAKWVQLVSGLRPRLERLHRQIDELLEKVIIEHKEAKSKAKQGQGEADEDLVDVLLNFQGGNDSDEDICLTDNNIKAIILDIFGAGGDTSASTIVWAMSELIRDPRVMKKAQHEVREIFNTRGNVGENCINELEYLKSIVKETLRLHPPAPLLLPRECGQACEIDGYHIPVKTKVIVNAWAIGRDPKYWTEPERFYPERFIGSSIDYKGSNFEYIPFGAGRRMCPGITFGLINVELSLAFLLYHFDWKLPNGMKGEDLDMAEQFGATIKRKDDLYLIPTAPIPSVV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3014 508 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PANTHER CYTOCHROME P450 71B11-RELATED 9 502 - -
Psa6g3014 508 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 502 - -
Psa6g3014 508 Coils Coil 237 257 - -
Psa6g3014 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3014 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3014 Psa-Chr6 253259541 253261136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3014 8 501 Cytochrome P450 AT3G26300 43.393 1.47e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3014 - - gmx:102665189 745.732