Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3010 ATGAATCGAGTGGCTTTGAATGCCATAATTGTTTATGAATCTAAGGATGAATTGTTAGAGGTTGAAGAAGATCAAGAAACTTCAAGGAAGAGGATTAAGAAACAAATATCTAGACCTTATAGGAAAGGGTTTCTGGATCTCTGGATTGGAGATCTGATTGTGAAAATACGCGGGAATCAGATTTTACTTCCCATAGATGGCGTCAATGATGTTTTTGATCCGCCACTTCCATCAAATTCAAATCCAGATCAACAACAACATCAACATCATCAAAATCAACATCAACAACATCAACAACTTTCCGTTGATGAAATTTCAAGCCCTCTTAGCGCCGCGCAAATTTTCGAGCTATGTAACCCTGAGTTATTTCCAGAAGCTTTGCAGAATTCTGAGGTTACATCAAGCTCAAATTGTTGCTATGAAGAGAATTCCTCGTATGCGACAAATATATTAGATGTAGAAACTAAGTTCAATAATAGCAATAGCAATAACAACGTAGTCGTCACAACTCCAAGTAGCACCAACAACATCAACAACAACAACAACAATAACAATAATAACAATAACAATTCCAACACTAGCAATAATCTGTCTGTTATCTTCGATTCGCAAGAAGAAATCGACAATGACATATCTGCCTCCATAGATTTCTCACTCTCACCATCTTTCAATGTTACTTCATTCCTTCCAGTAACATCAACACAGCAAGTAGAACAATTTGATTTCAATTCTCATGTTCAACAGCTAACAGCATGTTCATCCGTGGAAGGCTTTTCACAGTATCATAATCCAAATGATCCAGTTGCACCTCTTATGGGAGCTCCATTATCATTACCGCCTGTTTTTGAAGAGGATTGCATAACTTCTGTACCTTCTTATGTTCCTTTGAATCCTTCATCTCCTTCTTGCAATTATCTTAGTCCTGCCGGAATGGCCGCGTACATGCCTAATGGCCCTCTTACCACTGCTTTGTCTGCTGATAGTTCCGGTTTGTTTGGTGGAAATATTCTTCTTGGTTCTGAACTTCAGACTCAAGAGCTTGATTATCAAGGAGATAGTGGTAGAATTTTTTGCGCAGATCCTATTCAGAGGGTGTTTAACCCTCCTGATCTTCAGGCAATTAAGACTGAGAATCAACAACTGGTAGCTGGTTCTGGAAGTTCTGCATCTTTAACACCAGAAATCTCAAACTTGGAAGATTCAACATTCAAGGTTGGAAAGCTTTCTGTTGAAGAAAGGAAAGAAAAGATTCACAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCATGCCGCAAAACACTGGCTGATAGCCGACCTCGAGTTAGAGGACGATTCGCAAAGAATGATGATTTTGGAGAGGCGCAAAGAACTGCTAGTGGAAATCATGAAGAAGAAGATGAAGAAGAGGTAGTTGTGAAAGAGGAAGATGATATGGTTGATTCTTCAGATATATTTGCTCATATCAGTGGAGTGAACTCATTCAAATGCAACTATTCTATTCAATCATGGATTTAA 1536 0.3815 MNRVALNAIIVYESKDELLEVEEDQETSRKRIKKQISRPYRKGFLDLWIGDLIVKIRGNQILLPIDGVNDVFDPPLPSNSNPDQQQHQHHQNQHQQHQQLSVDEISSPLSAAQIFELCNPELFPEALQNSEVTSSSNCCYEENSSYATNILDVETKFNNSNSNNNVVVTTPSSTNNINNNNNNNNNNNNNSNTSNNLSVIFDSQEEIDNDISASIDFSLSPSFNVTSFLPVTSTQQVEQFDFNSHVQQLTACSSVEGFSQYHNPNDPVAPLMGAPLSLPPVFEEDCITSVPSYVPLNPSSPSCNYLSPAGMAAYMPNGPLTTALSADSSGLFGGNILLGSELQTQELDYQGDSGRIFCADPIQRVFNPPDLQAIKTENQQLVAGSGSSASLTPEISNLEDSTFKVGKLSVEERKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEAQRTASGNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3010 511 PANTHER CCT MOTIF FAMILY PROTEIN 102 511 - -
Psa6g3010 511 MobiDBLite consensus disorder prediction 449 470 - -
Psa6g3010 511 MobiDBLite consensus disorder prediction 449 480 - -
Psa6g3010 511 Pfam CCT motif 413 455 IPR010402 GO:0005515
Psa6g3010 511 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 102 511 - -
Psa6g3010 511 MobiDBLite consensus disorder prediction 79 101 - -
Psa6g3010 511 ProSiteProfiles CCT domain profile. 413 455 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3010 Psa-Chr6 252713969 252717993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3010 393 461 C2C2-CO-like Transcription Factor Family AT5G24930 42.029 2.41e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa6g3010 CCT 7.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3010 - - aprc:113871720 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3010 6 252713969 252717993 Psa6g3010 6 252713969 252717993 ECH