Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2979 ATGCGTCACAAAAAAAACTCTCTCACCTTCAATCACTCTTTCCTCTCTCTCTCTGGTAGAAAAACTTCACCCAAGCACCACCGTTCACCTTCAACCTTCACGCGACAACCTCTGACGAAACCCTTCTTTCCTCCGATAAACCCCTTCAACCTCATCACCCTTAACCGTGAATCCACCTCTATAGTTCACCACCGACCACCCTCTCCGTTCATCAACAACAGTTTTCCGGCAAACACCGCCGCACCACCATTGGCCGCACCTTCACTCCCCAACTCCTCCGTCTCGCTCACCTCACGACCAAACATACTCAAACCCGTCATCCAACCCCTCACCGTCGTCACCTTAACAGCCGCACCTTCCGTCGAACACGCCACCGCCGTTTTACTCACAAACCTAACACTACCCCCTCACACAACAAACTCACACTCAAGGATCTGGCGCCGATGGCACCGTAAGATCAATGTCAACCAGAAGCGTTATGCAGTCGTTTCGGCCATAGCTGCTTCCGCTGTTCCTTCACTTGTTCTCGCTCGTGGTCACAGGATCGAGGCAGTTCCTGAATTTCCTCTTGTTGTTGGTGATTTCGCCAAAGGAGTTGAGAAAGTAGAGGAAGCGATCAAGGTTTTGAAGAGGATCAGAGCTTTTCCCGATGCTGAGAAAGCTAAGGATAGCCATGGAATTCGTCCTGGAAAAGGGATGCAGAAGGATGTTGCAGTTTTGGAGATCGGTTTGTAG 735 0.5061 MRHKKNSLTFNHSFLSLSGRKTSPKHHRSPSTFTRQPLTKPFFPPINPFNLITLNRESTSIVHHRPPSPFINNSFPANTAAPPLAAPSLPNSSVSLTSRPNILKPVIQPLTVVTLTAAPSVEHATAVLLTNLTLPPHTTNSHSRIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIEAVPEFPLVVGDFAKGVEKVEEAIKVLKRIRAFPDAEKAKDSHGIRPGKGMQKDVAVLEIGL* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2979 244 ProSitePatterns Ribosomal protein L1e signature. 154 180 IPR013000 -
Psa6g2979 244 SUPERFAMILY Ribosomal protein L4 144 234 IPR023574 GO:0003735|GO:0005840|GO:0006412
Psa6g2979 244 PANTHER 60S RIBOSOMAL PROTEIN L4 143 233 IPR045240 -
Psa6g2979 244 MobiDBLite consensus disorder prediction 1 34 - -
Psa6g2979 244 Gene3D - 140 238 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2979 Psa-Chr6 250652551 250653671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2979 143 236 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 68.085 4.04e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2979 K02930 - gmx:100779764 144.05